KEGG   Daucus carota (carrot): 108220135
Entry
108220135         CDS       T05350                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108220135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108220135
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108220135
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 Amidase
Other DBs
NCBI-GeneID: 108220135
NCBI-ProteinID: XP_017249302
UniProt: A0AAF1B0C7
LinkDB
Position
5:1436804..1440461
AA seq 361 aa
MSDPSASPGKGGNKKRNLPSWMSAREDQKNGGENQKQAKGGKEDNEFSKLLEGVVFVLSG
FINPERGVLRSRAMEMGAEYQGDWNSNCTLLVCAFPNTPKFRQVESDCGTIVSKEWISEC
YDKKKLVDIDSYLMHAGKPWRKQIIASKTIQDQEPSTSKKSQKQVKKDAYSKPSPKSSVK
HGVASSTEHEYFVPSKVKKWAADDFSKTISWLESQDEKPDPSDIKKIAAEGILTCLQDAI
DSLKQDQEIQDISEQWSFVPQVVEELAKLERSQDKPDSLPKKHLYKQALACKDIYEKELK
ILNDSSPNKKKLKTGETKRTGKERNDTPTRSADYDSDETIEMTEEDIDKAYNSVASALSK
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtctgatccaagtgcaagccctggtaaggggggtaacaaaaagaggaaccttccgtcg
tggatgagtgcgagggaagaccagaaaaatggtggtgaaaaccagaaacaggctaaaggg
ggcaaggaggataatgagttttccaagctactggaaggggtagtttttgtactgtcgggg
tttattaatccggagcggggtgtattgcggtctcgagctatggaaatgggagcagagtat
caaggtgactggaattcgaattgcacattgttggtgtgtgcgtttcctaatacgccaaag
tttcggcaagttgagtcagattgtggaactatcgtttcaaaggagtggatatcagaatgt
tacgacaagaagaaacttgttgatattgacagttaccttatgcatgctggtaagccttgg
aggaaacaaattatagcttccaaaaccatccaagatcaagaaccatcaacatctaaaaaa
tcccagaagcaggtaaaaaaggatgcatattcgaagcccagtcctaaatcgtctgtgaag
catggtgtagcttctagtactgagcatgagtactttgtaccttctaaagtgaagaaatgg
gctgcagatgattttagcaaaaccatatcctggttggagagtcaagatgaaaagccagat
ccaagcgatataaagaagatagctgctgaagggattctgacttgtttacaagacgctata
gattctctgaagcaagatcaggaaatccaagatatatccgagcagtggagctttgtacct
caagtggtagaggaactggctaagcttgaacgttctcaagataagccagattcacttccc
aaaaaacatctatacaagcaagcactggcctgcaaagacatttacgagaaggaactcaaa
attttaaatgattcatctcctaacaagaaaaagctgaagactggtgaaaccaagagaaca
ggcaaagaacggaatgacacccccactagaagtgccgactatgacagtgatgaaacaatt
gagatgacggaagaggacatagataaagcatacaactctgtagcttcagctctcagtaaa
ttctga

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