Daucus carota (carrot): 108220226
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Entry
108220226 CDS
T05350
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108220226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108220226
03036 Chromosome and associated proteins [BR:
dcr03036
]
108220226
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108220226
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108220226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR3_2nd
MIOS_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
OKR_DC_1_C
Motif
Other DBs
NCBI-GeneID:
108220226
NCBI-ProteinID:
XP_017249421
UniProt:
A0A164XPK8
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All DBs
Position
5:complement(6374697..6376001)
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AA seq
344 aa
AA seq
DB search
MVASSSQKQENSDEQQRRSEIYTYEAPWHVYAMNWSVRADKSYRLAIGSLLEHYHNRVEI
VQLDDVNGEIKADPTLSFEHPYPPTKTIFIPDKECQKPDLFATSSDFLRIWQINSDSVEL
KSVLNNNRNSDFCGPLTSFDWNEAEPRRVGSSSIDTTCTIWDVERECVDTQLIAHDKEVY
DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYETSQPDTPLVRLGWNKQDPRYMATII
MDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSSCHICTAGDDSQALIWDLSTMGQ
PVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSNKLQILRV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgagcagctcgcaaaagcaagagaactccgacgagcaacaacggcggtcggag
atatacacatacgaagccccatggcacgtctacgccatgaactggagcgtccgcgccgac
aaaagctaccgtctcgccatcggcagtctcctcgaacactaccacaaccgtgtcgaaatc
gtccagctcgacgacgtcaacggcgagatcaaagccgaccccaccctctccttcgagcac
ccttatccccccaccaagaccattttcatccccgacaaggaatgccagaagcccgatctt
ttcgccacctccagtgacttcttgaggatctggcagatcaattccgactctgttgaattg
aaatctgtgctgaataataatcggaacagtgatttctgtgggcccctcacttcgtttgat
tggaatgaggcggagccgcggcgggtggggtccagtagtattgacacgacttgtactatt
tgggatgtggagagggagtgtgtggatactcaattgattgctcatgataaagaggtttat
gatattgcttggggtggggtgggtgtttttgcttcggtttctgctgatgggtctgttagg
gttttcgatttgagggataaggagcattcgactatcatttacgagacttcgcaacccgat
acccctttagttagattaggttggaataagcaggacccgaggtatatggcgacaattatt
atggacagtgctaaggttgtggttcttgacattaggtttcctactttgcctgttgtcgag
ttacaaagacatcaggccagtgcgaatgccattgcctgggctccccatagtagttgtcac
atttgtacggctggagatgactcacaggccttgatttgggatctttccactatgggacag
cctgtcgaaggtggcctcgatcctattttggcctatactgctggagccgagatcgagcaa
ttgcagtggtcttcctcccagcccgattgggttgctattgcgttttccaataagcttcag
attctgagggtatga
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integrated database retrieval system
