Daucus carota (carrot): 108220315
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Entry
108220315 CDS
T05350
Name
(RefSeq) syntaxin-51
KO
K08503
syntaxin of plants SYP5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108220315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108220315
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[C] (Qc)
STX8
108220315
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Gene cluster
GFIT
Motif
Pfam:
SNARE
NPV_P10
STX6_10_61_N
FapA
YjcZ
Motif
Other DBs
NCBI-GeneID:
108220315
NCBI-ProteinID:
XP_017249541
UniProt:
A0AAF0X2G4
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All DBs
Position
5:complement(11406396..11409929)
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AA seq
232 aa
AA seq
DB search
MASSMDSWPREYNEAVKLADDITGMISEKSSAPTSGPEAQRHFSSIRRKITILGTRLDSL
QSLLSKLPEKSLSGKEMNRRKEMLANLRSKVNQMASTLNMSNFANRDSLLGPESKPVDAM
SRASGLDNHGVVSLQRQIMKEQDEGLEKLEETVLSTKHIALAVNEELDLHTRLIDNLDDH
VDVTNSRLQRVQRTLAILNKRTKGGCTFMCLLLAVLGIVGLVVVIWLLVKYL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctatggattcatggccacgggaatataatgaagcagtaaaacttgctgat
gatataactggcatgatttctgaaaagagttcggcaccgacatctgggccagaagcacaa
cgtcatttttcttcaattagaagaaaaattaccatattagggactagactagatagcttg
cagtctcttctgtcgaagcttccagaaaaatcactttcaggcaaagagatgaatcggcgg
aaggaaatgcttgcaaatttgagatcaaaagtaaaccagatggcttcgactttgaatatg
tctaactttgccaatagggacagcttgcttgggccagaaagtaagccagttgatgctatg
agtagagcatccggtttagataaccatggcgtcgttagtctccaacgccaaattatgaaa
gaacaagatgaggggctagagaaattggaagagactgtattaagtaccaaacatattgca
ctggcagtaaatgaagaactcgatttacacacaagattgatcgataacttggacgatcat
gttgatgttacaaactcccgcttgcagcgagtgcaaaggactttggctatactgaacaag
cgcaccaagggtggttgtaccttcatgtgcctattgttagcagtgctcggaatcgtcggt
ctggtggtggttatatggttgcttgtgaaatacttgtga
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