Daucus carota (carrot): 108220399
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Entry
108220399 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108220399 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108220399
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108220399
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108220399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_10
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108220399
NCBI-ProteinID:
XP_017249643
UniProt:
A0AAF1B0E8
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All DBs
Position
5:complement(37192212..37195863)
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AA seq
442 aa
AA seq
DB search
MESSPRNSDCPSSSSSSSSSNFGFATASNFLHSPLSSLLEFSGVLHTHDHPHSSDAQGLH
ESWSGSNNNNNISSNSSSSSHDISSSSQEEVSIRIIGATGEQEENQTHSPTHSSSPEPDH
LSPDESHNAERNAAAAAAPFYHNRDSAFYQRYDLQQAARWMEQLLPFSFLLLLVFIRQHL
QGFVITIWVAAFMFKSNDILQKQTALKGERRRSILFGLSLVFTLHVISVYWWYLTDLLHL
LVMIPPKAIPPFWQAIFIIVVNDTLVRQAAMVFKCGILMYYKNSSGRNYREQGQLLTLVE
YSLLLYRSLLPTPVWYRFFYNKEFGSLFSSLITGLYLIFKLTSIPEKVQNFFASLKALSH
TEIKYGTNATSDQVSAAGDLCAICQEKMLAPILLRCKHIFCEDCVSEWFERERTCPLCRA
VVKSSDLRSFADGSTSLFFQLF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctctcctcgtaattcagactgcccttcttcttcttcttcttcgtcgtcttct
aacttcgggtttgctactgcttccaattttttacattcccccctttcgtcacttttagaa
ttttccggtgttcttcacactcatgatcatccacattctagtgatgcgcaaggcctacat
gaatcttggtcaggtagcaacaacaataacaacattagtagcaatagtagtagtagtagt
cacgacattagtagtagtagtcaggaggaggtttctattagaattattggtgcaacaggt
gagcaggaggagaatcaaacacattccccgactcatagttcatccccagagcctgatcat
ctgtctccagatgaaagtcataatgcagaacgcaatgctgctgctgcagctgctcccttt
tatcataatagagattctgctttttatcagagatatgatttacagcaagccgcgaggtgg
atggagcaactacttccattctcttttcttttgttgcttgtattcattcgccagcatttg
caaggctttgttattacaatttgggttgcagccttcatgttcaagtcaaacgatattcta
caaaagcagacagctctaaagggagaaaggaggcgttcaattctctttggcctctctctt
gtgttcactcttcatgtgataagcgtatattggtggtatctgactgaccttttgcatttg
ttagtcatgattccaccaaaagctataccacccttttggcaagctattttcatcatcgtg
gtaaatgatacgttggtccgtcaggcagcaatggtttttaagtgtggcatattgatgtac
tacaaaaatagcagtggaagaaactatcgtgaacagggtcaactgctaactcttgttgag
tattctctgctgctataccgttcactactgcccactccagtttggtatcgtttcttttat
aacaaggaatttggaagcctcttttcatctctgattactgggctgtatttgatttttaaa
ctcacatcaattcctgagaaggttcaaaatttctttgcttctttaaaagctttgtctcat
acagagatcaagtatggaaccaatgcaacatctgaccaggtcagtgcagctggagatttg
tgtgctatctgtcaggaaaagatgcttgccccaatcttactacgctgtaaacacatattt
tgcgaagactgtgtgtctgagtggtttgagagagaaagaacatgtcccctatgcagggct
gtggtgaaatcttcagaccttagatcatttgccgatggatccacaagcctattttttcaa
cttttctga
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