Daucus carota (carrot): 108220458
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Entry
108220458 CDS
T05350
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
dcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108220458
03410 Base excision repair
108220458
03420 Nucleotide excision repair
108220458
03430 Mismatch repair
108220458
03440 Homologous recombination
108220458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108220458
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108220458
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108220458
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108220458
MMR (mismatch excision repair)
DNA polymerase delta complex
108220458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
108220458
NCBI-ProteinID:
XP_017249725
UniProt:
A0AAF1AYJ5
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Position
5:complement(10448271..10454610)
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AA seq
441 aa
AA seq
DB search
MAVMEEEQSDIERKQSLYNSMDEEFKIQKEMYRGQQYSQIYFARLHLMRTLLYSLVPTWK
PHLPVCTVLGLEGDKECVIVGTLYKHMKLKPCVLDEYSKERSVTPLVQPHNFVHSDDYLI
LEDESGRVKLSGTTLSPSFYVTGIVVALHGKETGAGDFLVEDVLEAGLPPQLDPPNKLGE
DKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGDEKEQNNAAQIVQVVIAGDSVEIPRE
LLNGQNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFP
SSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGSEEVEFLERTLKWRHIAPT
APNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRLITGSDGQVVRLISIPRFSKTGTA
VMLNMRNLECHALSFGTEFSL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgatggaagaagaacagtctgacattgaaagaaagcaatctctttacaattcc
atggatgaggagttcaagatacaaaaggagatgtatagaggtcaacaatacagtcaaatt
tattttgctcgattacacttgatgagaactctcttgtactctcttgtacctacttggaaa
ccccatttacctgtttgcaccgttctgggacttgaaggagacaaagagtgcgtgattgtt
ggaacactgtacaagcacatgaagctcaaaccttgcgtccttgatgaatactccaaggag
agatcagttacgccgcttgtacaacctcacaatttcgtacactctgatgattacctgatt
cttgaagacgaaagtgggagagttaaacttagtggcaccacactttcaccttctttttat
gtcacaggcattgtggttgctttgcatggaaaagaaactggtgctggagattttctggtt
gaggatgtccttgaggctggcttaccgccacaactagacccaccaaataaattgggagaa
gataaatatgttgtgtttgtatcgggattgaatttgggaagcagctcttctaatccacta
caagttcagcttctcgttgatcacattacaggccatcttggagatgagaaggaacaaaat
aatgcagctcaaatagttcaagtagttattgctggggactctgttgagatacctcgtgag
cttcttaatggtcagaatttggcaccaaaagatcaatctaggttgtcagagccaataaaa
gaagtggatatcttgttgacacagattgctgcaagtattcctttggatattatgcccgga
ccgaatgatccatctaatttcgccatgccacagcagcctttacatagatgccttttccct
agttctgcgtcctacaacacttttaaatcctgtactaatcctcattcttttgaacttgat
ggtgtgagatttcttggaacctcaggtcaaaatatacatgattttgaaaagtattctgag
gggagtgaggaagttgagtttttggaaaggacattgaagtggaggcatattgcgccaaca
gcgccaaatacccttggttgttatccctttactgatagggatccatttttcgtggagagt
tgtccccatgtttattttgctggcaatcaaaataagtttggaactcgcttgataacaggt
tcagatgggcaggtggtaaggcttattagtattccaagatttagcaaaactggtactgca
gttatgttaaacatgagaaatcttgaatgccatgctctcagcttcgggacagagttcagt
ttataa
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