KEGG   Daucus carota (carrot): 108220525
Entry
108220525         CDS       T05350                                 
Name
(RefSeq) THO complex subunit 7B
  KO
K13176  THO complex subunit 7
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03013  Nucleocytoplasmic transport
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108220525
  09122 Translation
   03013 Nucleocytoplasmic transport
    108220525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108220525
   03041 Spliceosome [BR:dcr03041]
    108220525
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108220525
Spliceosome [BR:dcr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108220525
SSDB
Motif
Pfam: THOC7 TssC_VipB_C RLIP76_Ral-bd Inhibitor_I66 Viral_DNA_bp
Other DBs
NCBI-GeneID: 108220525
NCBI-ProteinID: XP_017249808
UniProt: A0AAF0X115
LinkDB
Position
5
AA seq 240 aa
MLKTRKVAGRGDAISSHYAFGQLEDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSFALEI
EKDADNSNDCERLAKAFLQELTTFELPLLKSKAVIDANLREKENFNELKAEINRQIIQAE
DDIEDLKKQLEESKVERQHKEECETIRKLIAMQPPRSETQRFLTDLEKEIALLEAENISG
SRTLELRKKQFALLLHVVDELQNTIEEEPRSLMEEMRNAMEDHKNGVEDASCGPDAMAVD
NT seq 723 nt   +upstreamnt  +downstreamnt
atgttgaaaaccaggaaagttgctggtaggggagatgcaatatcttcacattacgctttt
ggtcaacttgaagatgatacaattatcaaacacaggcttctcacccgcacaacaaccaca
aggggtgaacctccactgaaaaaacttcagaagaagtttacctcatttgctcttgagatt
gagaaagatgcagacaacagcaatgattgtgaacggctagcaaaagccttcttacaggag
cttacaacttttgaactaccacttcttaagagcaaggctgttattgatgcaaatttaaga
gagaaggagaattttaatgagctgaaggctgagatcaataggcaaataatacaggcagag
gatgatatagaagacttgaagaaacaactagaagagagcaaggtggaaaggcagcacaag
gaagagtgtgagacaattaggaaattaattgctatgcagccaccaagatcagagacacaa
agatttcttacggaccttgaaaaagaaattgctttgttggaggcagaaaatatatctggc
tcaaggacgctggagcttcggaagaaacagttcgctcttctattgcatgtggtggatgag
ttacagaacaccatagaggaagaaccgaggagtttgatggaggagatgcgaaatgcaatg
gaagatcataagaatggggttgaggatgctagttgtggtccagatgcaatggctgttgac
tag

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