Daucus carota (carrot): 108220544
Help
Entry
108220544 CDS
T05350
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108220544
03410 Base excision repair
108220544
03420 Nucleotide excision repair
108220544
03430 Mismatch repair
108220544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108220544
03036 Chromosome and associated proteins [BR:
dcr03036
]
108220544
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108220544
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108220544
DNA Replication Termination Factors
ELG1-RFC complex
108220544
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108220544
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108220544
Check point factors
HRAD17(Rad24)-RFC complex
108220544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Mg_chelatase
AAA_14
AAA_22
AAA_16
Viral_helicase1
Rad17
AAA_24
RuvB_N
AAA_11
nSTAND3
RCF1-5-like_lid
AAA_5
AAA_assoc_2
ABC_tran
AAA_25
AAA_19
MeaB
IstB_IS21
AAA_28
DNAX_ATPase_lid
AAA_30
bpMoxR
AAA_18
NTPase_1
AAA_7
DO-GTPase1
RNA_helicase
AAA_3
Motif
Other DBs
NCBI-GeneID:
108220544
NCBI-ProteinID:
XP_017249835
UniProt:
A0A164ZGD1
LinkDB
All DBs
Position
5:41951523..41954116
Genome browser
AA seq
334 aa
AA seq
DB search
MASSSSASMISQGYEMPWVEKFRPSKVCDIVGNEDAVSRLQVIARDGNMHNLILAGPPGT
GKTTSILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIIL
DEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILG
RLMVVVAAEKVPYIPEGLEAIIFTADGDMRQALNNLQATFSGFQFVNQENVFKVCDQPHP
LHVKNMIRNILEGKFDDACSGLKSLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKET
GFAHMRICDGVGSYLQLCGLLAKFALVRETAKAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgtcgtcagcatcgatgataagccaggggtatgaaatgccatgggtggag
aagttcagaccttccaaagtctgcgatattgtcggcaatgaagacgccgtttccaggctt
caagtcatcgctcgtgatggcaacatgcataatctcatcttagctggacctcctggaact
ggtaaaaccaccagtatactggctcttgcacatgagctcttgggaccaaactgcaaggag
ggagtgttggaactcaatgcatcagatgacaggggaattgatgttgtgagaaacaagatt
aagatgtttgcgcaaaagaaggtcactctacctcctgggcggcacaagattatcattttg
gacgaagctgacagcatgacatctggagcacaacaagccttaaggaggacgatggagata
tattcgaactccacacggtttgctcttgcttgcaacacttcctcaaagatcattgagcct
attcagagtagatgtgcccttgtaaggttttcaagattatcagatcaagagatccttgga
cgtctcatggtggtggttgcagcagaaaaggttccttacattccagaaggccttgaagct
attatattcactgctgatggtgatatgagacaggcattgaataacttgcaagcaacattt
agtggatttcagttcgtgaaccaagaaaatgtgtttaaggtctgtgaccagcctcatccc
ctgcatgtaaagaacatgatccgcaatattctcgagggaaaattcgatgatgcctgttct
ggtctaaagagtctctacgatctcggctattcgcccactgacatcatcacaacgcttttc
cgaatcataaagaactatgatatgccagaatacctgaaattggaatttatgaaggaaact
ggttttgcccatatgagaatctgcgatggagttggttcatatcttcaactttgtggtcta
ttggctaagtttgcattggtccgggagacagccaaagctgcataa
DBGET
integrated database retrieval system