Daucus carota (carrot): 108220557
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Entry
108220557 CDS
T05350
Name
(RefSeq) tlg2p-like protein a isoform X1
KO
K08489
syntaxin 16
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108220557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108220557
Membrane trafficking [BR:
dcr04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
108220557
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
MCPsignal
Motif
Other DBs
NCBI-GeneID:
108220557
NCBI-ProteinID:
XP_017249848
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All DBs
Position
5:33662776..33667996
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AA seq
320 aa
AA seq
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MATRNRTSLFKNYRTTLNNNRVPVSSSSTFNTAVIEMSPLVPFSNRSSYAPLSTTDDPGP
SSTDAFTIGLPPDWVDVSEEVSSNIRSARAKMAELAKVHAKALTPSFGDGKKDQYIIEER
TQEITALLRKSEKKLKKLSDGGPSEESSIRKNVQRSLATDLQNISVELRKKHSSYLNRLR
QQKEDHDGLDLEMNLNENKSRLADDEFSDVGFTEHQMTKVKKSEHFTAEREREINQVVES
VNELAQIMKDLSVLVIDQGTIVDRIDYNIQNTAASVEEGLKQLKKAERSQKSGGMVKCAT
VLVILCFIMLILLILKEILF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagaaatagaacaagcttatttaaaaattacagaacgacattaaacaacaat
cgcgtgccagtatcatcttcatctacgttcaacactgctgtcattgaaatgtcgcctctc
gttcctttctccaatcgatcttcttatgctcctctctctactactgacgatccaggtcct
agcagtacagatgcgtttactattggcttgcctccagactgggttgatgtttctgaagaa
gtttcttctaatatacggagcgctcgagcaaaaatggcagagctagccaaggttcatgca
aaagctttaacgccttcttttggagatggaaaaaaggatcagtatataattgaagaacgt
actcaggagattacagctctgttaagaaagtcagaaaagaagctaaagaaactttctgat
ggtgggccttctgaggaatcaagtatccgaaaaaatgttcagcgctctctcgcaacagac
cttcaaaatatatcagtggagcttcgtaagaaacattcctcttatttgaatcgcttacgt
cagcaaaaagaggatcatgatgggcttgacttggagatgaatttgaatgaaaataaatcc
agattggcagatgatgaatttagtgatgtgggttttactgaacatcaaatgactaaagta
aagaaaagtgagcactttacagctgaaagggaaagagagataaaccaggtggtggaatca
gtgaacgagctggcccagatcatgaaagatctatcagtccttgtgatagaccagggaact
attgttgatcggatagactacaacattcagaacactgctgcatcagtagaggaaggcctc
aaacaactgaaaaaggcagagagaagccaaaagagtgggggaatggtgaaatgtgcaact
gttcttgttattctgtgcttcatcatgctaatactcctaatcctcaaggaaatactcttc
tga
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