Daucus carota (carrot): 108220570
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Entry
108220570 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase SP1
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108220570
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108220570
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108220570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
Zn_ribbon_8
Zf_2nd_IFT121
YhfH
DUF7129
CD20
Motif
Other DBs
NCBI-GeneID:
108220570
NCBI-ProteinID:
XP_017249865
UniProt:
A0AAF1B3B1
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All DBs
Position
5:complement(34587701..34592453)
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AA seq
314 aa
AA seq
DB search
MSEEIDKLRWGIGCLVGAALSYLLGEESRINAESLGRVIRVVQIKDSSLLFDTASIVLPL
IVTVSGIVGSNKGLKLESSKVKAVILHETTSKCILKPCVKNEVDNRGNSVEVCSWKEEQK
GSHTVKKEVPWYLDDGTSKVFVLNAESASKFWESVGRHVGSCKSQILPVRGTVVDSRQKE
PDVLVKTTVTTQPLLITGTPLTVIGEAVKDRSGRIRIQQPERGPFYVSRKNIDELNDEFA
GVERSLKCVSLVLSSCGIFLIGMHTFQCIKKRFFKQKSCKRCGHRINSEQRSSQLTECPL
CREQANQLDRAFRG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagattgacaagctgcgttggggaataggctgtttagttggtgcagcactg
tcgtatcttcttggagaggaatctcgaatcaatgctgagtcgctggggagggttattcgc
gtagttcaaataaaggattcgtcactgttatttgatactgcatccatagtattgccttta
atcgtcactgtatctggaatagtcggttcgaataagggacttaagctggagtctagcaaa
gtgaaggccgtgattcttcatgagacgacaagcaagtgcattttgaaaccctgcgtaaaa
aatgaagttgacaacagagggaatagtgtagaagtttgctcctggaaagaggaacagaaa
ggttctcatactgttaagaaagaggttccgtggtacctggatgatggaactagtaaggtc
tttgtgttaaatgccgagagcgcctcaaaattttgggaatcagtgggtcgacatgtagga
agttgcaaatcacagattttgccagtaagaggaacagtagtggacagcaggcagaaagaa
ccggacgttctagtcaagacaactgtcacaacccaaccacttctcataactggtactcca
ttaaccgttattggggaggctgttaaggatcggtccggaaggatccgaattcaacaacca
gaaagaggcccattttatgtctctcgaaagaatattgatgagctcaatgacgagtttgca
ggagtggaacggtcgttgaaatgtgtctctctagtgttgtcatcctgtggtatttttctg
atcgggatgcatacttttcagtgtatcaaaaaaagattttttaagcagaagtcgtgcaag
agatgtggtcataggatcaacagtgaacaacgttcttcacagctgacagagtgtccactt
tgccgtgaacaggctaatcagttggacagggctttccgcggttag
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