Daucus carota (carrot): 108220608
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Entry
108220608 CDS
T05350
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108220608
03410 Base excision repair
108220608
03420 Nucleotide excision repair
108220608
03430 Mismatch repair
108220608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108220608
03036 Chromosome and associated proteins [BR:
dcr03036
]
108220608
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108220608
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108220608
DNA Replication Termination Factors
ELG1-RFC complex
108220608
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108220608
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108220608
Check point factors
HRAD17(Rad24)-RFC complex
108220608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
Mg_chelatase
AAA_14
SLFN-g3_helicase
AAA_5
AAA_11
AAA_24
AAA_2
AAA_assoc_2
DUF3802
nSTAND3
ResIII
AAA_19
PhoH
AAA_30
AAA_28
DUF815
AAA_7
DNAX_ATPase_lid
NPHP3_N
AAA_25
TIP49
RNA_helicase
Parvo_NS1
bpMoxR
AAA_18
AAA_17
IstB_IS21
ATPase_2
NB-ARC
Motif
Other DBs
NCBI-GeneID:
108220608
NCBI-ProteinID:
XP_017249904
UniProt:
A0AAF1B2I8
LinkDB
All DBs
Position
5:complement(39244075..39253075)
Genome browser
AA seq
341 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPRQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGTQRHGNYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMND
RIAYICSAEGLDLDPEALSTLSSISQGDLRRAITYLQGAARLFGSSILSTDLVTVSGVIP
EEVVQALYSTCKSGNFELAEKEVSNVIAEGYPVSQIISQLFDLIVGLDDVSDEQKARIFK
KMGEADKCLIDGADEYLQLLDVASNAMRALCNMPLEFPSEF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgttgcaaagctctcagccttgggtcgaaaaatatcgacctaggcaagtc
aaggacgtagctcaccaagacgaggtcgttcgtgtcctcactaacactctcgaaaccgct
aattgcccacacatgctgttttatgggccacctggaactggaaaaactactactgctctt
gccattgctcatgagctttatggacctgaactttacaagtctagggtgctggagcttaat
gcgagtgacgatcgtggaatcaatgtagttcgcacaaaaataaaaaattttgctgctgta
gctgtaggaactcagcgtcatgggaattacccttgccccccttacaaaataatcatcctg
gatgaggcagattccatgaccgaagatgcgcagaatgccttgcgccgaaccatggaaaca
tactccaaagttacaagattttttttcatttgcaattacatcagcagaatcattgagccg
cttgcttctagatgtgcaaagtttagatttaagccacttactgatgaaataatgaatgat
cgtatagcatacatatgcagtgcggaaggccttgatctggatccagaggctctttcgacc
ttgagttctatctctcaaggtgatttacgccgggcaataacctacctgcagggagctgct
cgcttatttggatcttcaattttatccacggacttggttacagtatctggggtcatccca
gaggaagttgtacaggctctttattccacttgcaaaagtggtaactttgaattagccgag
aaggaagtcagtaatgtaattgcagagggatatccagtttctcagataatttctcagttg
tttgacctcattgttggactggatgatgtatcagatgagcagaaagcaagaatatttaag
aaaatgggtgaagcagataagtgtctcattgatggagcagacgagtacttgcagctgttg
gatgtggccagcaatgcaatgcgagcactatgtaacatgccactagaatttccttctgag
ttctaa
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