Daucus carota (carrot): 108220659
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Entry
108220659 CDS
T05350
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00450
Selenocompound metabolism
dcr00970
Aminoacyl-tRNA biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108220659
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108220659
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108220659
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108220659
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108220659
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108220659
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108220659
Prokaryotic type
Other AARSs
108220659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108220659
NCBI-ProteinID:
XP_017249972
LinkDB
All DBs
Position
5:37119801..37125039
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AA seq
640 aa
AA seq
DB search
MKFSRCKGNHIPFGIGRVDRLCLKKEALMVSGNSTCMLMLTQTLSVLCFRKDMKKVPIPG
KRNMLITSALPYVNNVPHLGNIIGCVLSADVFARFCRLRGYNVLYICGTDEYGTATETKA
MEEGLTPKEICEKYHAIHKDIYNWFDISFDEFGRTSTPQQTGICQAIFTKLFKNRWISEN
TMQQPFCDTCQRFLADRFVEGTCPKPDCSYDSARGDQCEKCGKLLNPAELKNPRCKVCRA
TPRIRDTDHLFLELPLLKDILVKYINKMSVEGSWSENALKATQAWLKEGLKPRCITRDLK
WGVPVPHEKYEDKVFYVWYDAPIGYISITSCHTSEWEKWWKNPENVELYQFMGKDNVPFH
TVMFPSTLLGTGENWTLMKSISVTEYLNYESGKFSKSKGVGVFGNDAKDTKIPSEVWRYY
LLTNRPEASDTLFTWKDLQAKLNSELLNNLGNFVNRVLSFIAKPKGRGYGSIVPDAPGAE
THCPTKALAERVGKYVEQYMDDMEKIKLKQGLKTGMSISSEGNAYLQNTEFWKLYKEDES
SCAIVIRTSVGLVYLIACLLEPFMPSFTMEVFKQLNLPPKKVFSLSDKDGDLGQVSRPWE
FLPAGHVIGTPAPLFKELTNEEVEHFSRKFAGSQATRAAT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtagatgcaaggggaatcacattccatttggcattggcagagttgataga
ttgtgcctaaaaaaagaagctttaatggttagtggaaactcaacttgcatgctgatgctg
actcagacactcagtgttctctgcttcaggaaagacatgaagaaggtacctattccaggg
aaaagaaacatgctgattaccagtgctttgccttatgtcaataatgtccctcatctcggc
aacatcattggctgtgttcttagtgctgatgtttttgctcgcttttgccggctccgtggc
tacaatgtcctatacatatgtgggactgatgaatatgggacagctacagagacaaaagcc
atggaagaaggtttaaccccaaaggagatatgcgaaaaataccatgctatacacaaagat
atatacaattggttcgacataagctttgatgaatttggacgtacatcaacacctcagcaa
actggaatctgccaagcaatatttacaaaattgtttaaaaataggtggatttcagaaaat
acgatgcagcagcccttttgtgacacttgtcaacgcttcttagctgaccggtttgtcgag
ggtacctgtccaaagccagattgcagttatgattctgctaggggagatcaatgtgaaaag
tgtggaaaactattgaatccagctgaactgaagaacccaagatgcaaggtctgtcgggct
actccgcgaatcagagacactgatcatttgttcctagagctgccattgctgaaagatata
ttagtcaagtacatcaacaagatgtcagttgaaggatcctggagtgagaatgctcttaag
gctacacaagcatggcttaaagaaggacttaagcctcgatgcattactagagacctcaag
tggggagttccagttccccatgaaaaatatgaagataaggttttttatgtgtggtatgat
gcccctattggatatatatcaattacttcatgtcatacgagtgaatgggaaaaatggtgg
aaaaatcctgaaaatgtcgagctgtatcaatttatggggaaggataacgtaccatttcac
actgtaatgtttccttctacacttcttggaaccggagaaaattggaccttaatgaagagc
attagtgtgacagaatatttgaactatgaatcaggaaagttttcaaagagtaaaggggta
ggagtgtttgggaatgatgctaaagatacaaaaattccatctgaggtttggcgatattac
ctactaactaataggcctgaggcctcagatacactatttacatggaaggacttgcaagca
aaactgaactcagagttgctgaataatctgggaaattttgtgaatcgagtcttgtccttc
attgctaagcccaaaggacggggatatgggtcaatagtcccagatgctcctggtgcagaa
actcattgcccgacaaaggcacttgcagaaagagttggtaaatatgttgagcaatacatg
gatgacatggagaagatcaaattaaagcaaggacttaaaactggaatgagcatatcaagt
gaaggaaacgcttatctgcaaaatactgaattctggaagctgtacaaggaagatgaaagt
tcatgtgcaattgttataagaacatcagttgggctggtctatttgatagcatgcttgtta
gaaccgtttatgccatcatttactatggaggtattcaagcagctgaacttgcctcctaag
aaagtattttcactttctgacaaagatggcgatttaggacaagtgagcagaccatgggaa
ttcttgcctgctggtcatgttatcggaactcctgctcctttattcaaagaactgacaaat
gaagaagttgagcattttagcaggaaatttgctggatctcaagctaccagggctgcaaca
taa
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