Daucus carota (carrot): 108220708
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Entry
108220708 CDS
T05350
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 24 homolog 1
KO
K12193
charged multivesicular body protein 3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108220708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108220708
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108220708
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108220708
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108220708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
HTH_11
RNAseD_HRDC_C
PSD4
RVT_N
Motif
Other DBs
NCBI-GeneID:
108220708
NCBI-ProteinID:
XP_017250044
LinkDB
All DBs
Position
5:38396965..38402419
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AA seq
220 aa
AA seq
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METVRNILKPKVEPQKQLREWQXRECLHVDRQIRDIEREEKNVQKAIKEAAKRNDMSSAK
SLAKELIRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKIVNNLMKAP
QLAVTMQEFSKEMTMAGVIEEMVNDSVDSAIDSEDIEEETEEEVEKVLTAIAGETAAQLP
QAVRRERLKQPAQSVEDAEEEGAADEELEEIRARLAKVRS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggagacagtaagaaacatattgaagcccaaagtagagccccagaaacaattgagagag
tggcagnncagagagtgtcttcacgttgatcgtcaaattcgagatattgagagagaagag
aaaaacgtgcagaaagcgattaaagaggctgctaagaggaatgatatgtcttcagctaaa
tcgcttgcgaaggagctaatcagatctagacgaaccgtgaaccgtctgcatgaaaacaag
gctcagttgaattcaatatcaatgcaccttggagaaagtgttgctattgctcgtacagtt
gggcacttgtcaaagagtgctgaagtgatgaaaattgtcaataacctcatgaaggctcct
caattggctgtaacaatgcaagaatttagcaaagaaatgacaatggctggtgtaatagaa
gagatggtgaatgactctgttgattctgcaatagattcagaggacattgaagaggagacg
gaagaagaagttgagaaggtcctgacagcaatagctggtgaaactgctgcacagcttcca
caagcagtcagaagagaaagattgaagcaacctgcccagtctgttgaagatgcagaggaa
gaaggtgctgctgatgaagaactagaagaaataagggctcgtcttgccaaagtaaggtca
taa
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