Daucus carota (carrot): 108220839
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Entry
108220839 CDS
T05350
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00900
Terpenoid backbone biosynthesis
dcr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108220839
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108220839
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
108220839
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
108220839
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108220839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
LRRCT_2
PPR_1
Motif
Other DBs
NCBI-GeneID:
108220839
NCBI-ProteinID:
XP_017250197
UniProt:
A0A164YD65
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All DBs
Position
5:complement(26241517..26246939)
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AA seq
413 aa
AA seq
DB search
MMSMKCQNLDFSRLGPDFAAFGFSYNASFDRYMIGKRCNGVPRAVQNGYGAQRLFCFRQD
IGATEASIEGVAPIPAPLEEVKTGSRSPISLVNLFELVADDLIILNNNLQSIVGADNPVL
MSAAEQIFSAGGKRMRPALVFLVSRATAEFVGLKDLTKEHRRLGEIIEMIHTASLIHDDV
LDESDMRRGKETVHQLYGTRAAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGE
IKQASSLFNCDVGLDEYLTKSYYKTASLIAASTKGASIFSGVNSDTSEHMYQYGKNLGLS
FQVVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALDKEPKLRNIIDSEFCESGSLDE
AIELVKRCGGIEKAQALAKEKADLAIQSLQCLPSSSFRLALEEMVQYNLERIE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaatgaaatgccagaatcttgatttttctcgacttgggcctgattttgcagct
ttcgggttctcatataatgcttcatttgatagatatatgattggaaaacgttgtaatgga
gttcctagagctgtccaaaatggctatggtgctcagaggttgttctgtttccggcaagac
attggagcaactgaagcttctatcgaaggggtcgcaccgattcctgcaccactggaggag
gtgaaaactggctcaagaagtccaatatctctagtgaatttgtttgagcttgttgcggat
gacctgatcatattgaataataatttgcagtcgattgttggtgcagacaatccagttttg
atgtccgctgcagaacagatctttagcgccggtggaaagaggatgagacctgctttggtt
tttctagtgtcaagagccactgcagaatttgtaggcttgaaggaccttactaaagaacat
agacgtctgggggagatcattgaaatgatccatactgcaagcttgatacatgacgatgtg
ctagatgaaagtgacatgagaagaggaaaagaaacagttcatcaactctatggtactcgt
gcagctgtgctagcaggggatttcatgtttgcgcagtcatcatggtacctggctaatctg
gaaaatcttgaagtcataaaactcatcagccaagttatcaaagattttgcaagtggcgaa
ataaagcaggcttccagcttgttcaattgtgatgtggggcttgatgagtacttgaccaaa
agctactataagacagcctccttaatagcagctagcaccaaaggagcttccatttttagc
ggagtcaacagtgacacaagcgagcatatgtatcagtatggtaagaatcttggtctgtcc
ttccaagttgtggatgacatactggattttactcagtctactgagcaactgggaaagcca
gcaggaagtgacctcgcaaagggaaaccttactgcacctgttatatttgcattagacaaa
gaaccaaaactgaggaacatcattgactcagaattttgtgagagtggttcacttgacgaa
gctattgagctagtgaagagatgtgggggaattgaaaaggctcaagctttagctaaagaa
aaagctgatttagcaatccaaagtctccagtgccttccttctagttcctttcggttggcc
ctggaagaaatggtgcaatataatcttgaaagaatcgagtga
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