KEGG   Daucus carota (carrot): 108221353
Entry
108221353         CDS       T05350                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108221353
Enzymes [BR:dcr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108221353
SSDB
Motif
Pfam: Pectate_lyase_4 NosD Beta_helix
Other DBs
NCBI-GeneID: 108221353
NCBI-ProteinID: XP_017250725
LinkDB
Position
1
AA seq 419 aa
MAVPVKSISLTSLLLLLVLLGAMASANLSVEDEGLSEHAVGDPEEIAHMLHTSILNSTDR
RKLGYSCATGNPIDDCWRCDPNWFINRKRLAGCGVGFGRDAIGGRDGRFYVVTDPGDDDP
VNPRPGTLRHAVIQNEPLWIIFNRDMGITLKQELIMNSYKTIDGRGVNVHIANGACITIQ
FISHVIIHGLHIHDCRPTGNAMVRSSPSHFGWRSMADGDAISIFGSSHVWVDHNSLSNCA
DGLVDAVMGSTAITVSNNFFTHHNEVMMLGHSDSYWGDTKMQVTIAFNHFGEGLVQRMPR
CRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNNGYAKQVTKRVNTNADQWKG
WNWRSEGDLFLNEAYFVPSGSRASASYARASSMPAKSSSMVGTITSGAGVLNCRKGHPC
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcggttcctgttaaatccatctctttaacttccctgctacttctacttgtcttgctt
ggagccatggcctccgctaacttaagtgtggaagatgaaggtttgagcgagcatgcagtt
ggtgacccagaggagattgctcacatgcttcacacgagcatacttaacagcactgacaga
aggaaattgggatattcctgcgcaactggaaatcccattgatgattgctggcgttgtgat
cctaattggttcatcaatcgcaagcgcctggctggttgcggtgtaggttttggccgagat
gccattggaggccgtgatggccggttttatgttgtcactgatccgggtgatgatgaccct
gtaaacccccggcctggcactctgcgccatgctgttatccaaaacgagcccctctggatc
attttcaaccgcgatatggggataacattgaagcaggagctcataatgaacagctacaag
accattgatggccgcggagtcaatgtccatattgctaatggagcctgcatcaccatccag
tttattagccatgttattattcatggtttacatatccatgactgcagacccactgggaat
gctatggttaggagctcaccttcccattttggctggagatcaatggctgatggtgatgcc
atttccatctttggctcgagccatgtatgggttgatcacaattcgctatccaactgtgct
gacggccttgttgatgctgtcatgggctcaactgccatcacagtttctaacaatttcttc
actcatcacaatgaggttatgatgttgggtcacagtgacagctactggggggacacgaaa
atgcaagtgacaattgccttcaaccattttggagagggtcttgtgcagagaatgccaagg
tgcagacacgggtatttccatgtggtcaacaatgactacactcactgggagatgtacgcg
attggtggaagtgcaaacccgacaatcaacagccaaggcaaccgattccttgccccaaac
aatggttatgcaaagcaggtgacaaagagagtgaatactaatgctgaccagtggaaaggt
tggaattggagatcagagggtgacttgtttctgaatgaggcctatttcgtgccatctgga
tctcgagcttcagccagttatgccagagcttcaagcatgccggcaaagtcatcttccatg
gtcggcaccatcacttcaggagctggtgtccttaactgccgcaagggacacccatgttag

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