Daucus carota (carrot): 108221749
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Entry
108221749 CDS
T05350
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108221749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108221749
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108221749
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DUF4660
Motif
Other DBs
NCBI-GeneID:
108221749
NCBI-ProteinID:
XP_017251095
UniProt:
A0A164ZBM2
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Position
5:39706462..39710081
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AA seq
539 aa
AA seq
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MSENNTSENSAGDGTPMPENPKFPEGLRVLLVDDDPTSLKTVSAMLQKCKYRVTPVTIAT
EALALLRANKDDYDLVMTDVRMPDMDGFELLKIIGLEMDIPVIMMSVDDKRENVMKGVMH
GARDYLVKPIRILELQNIWQHVLRKTALDPEKSSLITEEIVVGNLPLKKRQGKDKEKEDA
NAISDGSCSMKKRRFAWTQELHQKFVEAVHHLNADKAVPKQIVDIMKEPGLTREIVASHL
QKYRNYLKREQMRMTESGVYNNGQKGIHEAYLNPTPTSYSDYRPILRDPNNGCSSGSGTT
SFRDHLPKPEALTNSQLNDSFMIGSLNQQSLWSQQTYNPPHMPNQVQAPKPTSVLGNIPL
AQAQQWVANPPGRVMFGDYVNMSSQIPNFGTVQAGPQLGFANFAGQSGFPPSKLPSTENA
LHPGPSGAFGIVGAPYQMLDGASNQISQPFQRNVLPGQHNGNVISTAFSGGVGSDCRGYP
VDFGDMDKPRVNGQGGQGAYMQLLTEKMDNNYHNSLSSIDDELSTEGEQIAPTSSAPMK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaataatacgagtgagaattccgccggtgacggcactccgatgccggaaaac
ccgaagttcccggagggcctgcgagttcttctcgtcgatgatgaccccaccagtcttaag
acagtgtcagccatgctacaaaagtgcaagtatcgagttacgccagtgacaatcgcaact
gaagcgctggcgttgttaagggcgaacaaagatgactacgatttagtcatgactgatgtt
agaatgccggacatggatgggtttgagctcctgaaaataattggccttgaaatggacatc
ccagtgataatgatgtccgtggatgataaacgggaaaatgtaatgaagggtgtcatgcat
ggagctagggactacttggtgaaacctatcagaattttggagcttcagaacatttggcaa
catgtgttgaggaaaactgccttggatccagaaaagtcatcgttgatcactgaagagata
gttgtgggaaacttacctcttaaaaagcgacaagggaaagacaaggaaaaggaagatgca
aatgctatctccgacgggtcctgctctatgaagaaacgaaggtttgcttggacacaagag
ctgcaccagaagtttgtagaagcagttcatcacttgaatgcagataaagcagtcccgaaa
caaatagttgacatcatgaaagagcctgggcttacccgagaaatcgttgctagtcatctc
cagaagtacaggaattatttgaagagagaacagatgaggatgacagaaagcggtgtctat
aataatggtcagaaaggaatacatgaagcttacctcaatcctactccaacttcatattca
gattatagacctatattaagagacccaaacaatggctgcagcagtggcagtggtacaact
tccttccgcgatcacttgccaaaaccagaagcattaaccaattctcagctgaatgattcc
tttatgattggttctctaaaccaacagagcttgtggtctcagcagacttacaacccacct
catatgccaaatcaagtacaagcacccaaacctacttcagtgcttggaaatatcccatta
gctcaggctcagcaatgggtggcaaatcctccaggaagagtgatgtttggggattatgtt
aatatgtcatcacaaattcctaattttggcactgtgcaagctggccctcaacttggtttt
gccaattttgctggccaatctggttttcctcctagcaaattgccatcgactgagaatgcc
ttacatccaggcccttctggtgcttttggcattgttggagctccttaccagatgctggac
ggggcttcaaaccaaatcagtcaaccttttcagcgcaatgttttacctgggcaacacaat
ggaaatgtcatctcgactgctttcagtggaggagtgggctcagattgtagaggatatcca
gttgacttcggggacatggacaaacctagagtcaatggacagggtggtcagggtgcatat
atgcagcttcttacagaaaagatggataacaattatcacaacagtttgagttccattgat
gatgaattatctactgaaggggaacagattgcaccaacttcatcagcccctatgaaatga
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