KEGG   Daucus carota (carrot): 108221788
Entry
108221788         CDS       T05350                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-T1-3
  KO
K15188  cyclin T
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108221788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108221788
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108221788
    Brd4/P-TEFb complex
     108221788
    7SK RNP complex
     108221788
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C Cyclin_C_2
Other DBs
NCBI-GeneID: 108221788
NCBI-ProteinID: XP_063950300
LinkDB
Position
5:42264120..42269833
AA seq 650 aa
MAGVLSGDPLQHGLYEGGSSYSNNQSEDGSGGGGQWYYSRKEIEENSASRKDGIDLKKET
YMRRSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHARNDRRTIATVCMFLAGKVE
ETPRPLKDVILVSYEIIHRKDPDGAQKIKQKEVYEQQKELILMGERVVLATLGFDLNVHH
PYKPLVDAIKKFGVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL
PHDAETSWWLEFDVHPLQLEEVSNQMLELYEQNKVPHSQTSEVEGSAVSVPTPRAPTKAP
PTTEERLVINSNSQGRGATSKTGLVKSGSSRPAHDQSYLDISDAPPRTTPNGNSDYASTH
INGQPDQKGDIMVNDGQFFGSESFPHQGNPEEVQGGSMYDTEGHDGTDLERNDGRSGTRV
AKDFRDKWNSRYKDHRDGKIGHSPREAVINIDKNKVKAALEKRKKARGSTTRKTDFTDED
DLIERELEDGIELAVESEKSRSKREQNWSSDEYGHHSRNQDEDGDGEHETKWQSPLKNEF
DNVEEGEVPTFDDTGRSYQSSNIRKRKAGSPLDRSVVGKRHEYMTSVSNQHDHDNFQEDR
GXLVRLSEKDRKKYVQENDALCACWMKIVSLHTTTTTRRCSMYVTKNQNY
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggctggggtattgtcgggcgatcctttacaacatggattgtatgaaggaggatcttct
tacagtaataatcagtcggaagatggaagtggtggtggtggacaatggtattattcccga
aaggaaattgaagaaaattctgcttctagaaaagacgggattgatctcaagaaagagact
tatatgcgcaggtcttattgcactttcttgcaagacttgggcatgaggcttaaagtaccc
caggtaacaattgctacagcgataattttttgtcatcgattctttcttcgtcagtctcat
gcaaggaacgacaggaggaccatagcaacagtatgcatgttcctcgcaggaaaggttgaa
gaaacacctcgcccgctgaaagatgtcatccttgtttcttacgaaattatacatagaaag
gatcctgatggtgcacagaagataaagcaaaaggaggtttatgaacagcaaaaagagcta
attttaatgggagaaagggttgtacttgctactcttggttttgatcttaatgtgcatcat
ccgtacaagcccctcgtagatgctataaaaaaatttggagtagctcaaaatgcactggct
caagttgcatggaattttgtgaacgatgggcttcggacatctctgtgcttgcagtttaag
cctcaccatattgcagcaggtgccatcttccttgctgctaaatttctcaaagtaaagctc
ccacatgatgctgagacaagttggtggctagagtttgatgttcatccactccagttggaa
gaggttagtaatcaaatgttggaactttatgaacaaaataaagtgccacattctcagact
agtgaagttgaaggcagtgctgttagtgtacccacaccaagagccccaacaaaagctcct
cccacaactgaagagcgtcttgtaataaacagtaattctcaaggtaggggcgctacttca
aaaactggacttgtgaagtcagggtcatctcgtccagcccatgaccagtcatatcttgac
attagtgatgctcctccaaggacaacaccaaacgggaacagtgactacgcaagcacacat
ataaatggccaaccagaccagaagggagatattatggttaatgatggtcagttttttggc
tctgaatcttttcctcaccagggtaaccctgaagaagttcagggtggttcaatgtatgat
actgagggacatgacgggacagatctagaaagaaatgatgggagaagtggcacaagggta
gcaaaagacttcagggacaaatggaacagccgttacaaggatcatagagatggaaaaatt
ggccactcaccaagggaagcagtgataaatattgataaaaacaaggtaaaagcagctctc
gagaaacggaaaaaggcgcgtggttctacaacgcgaaaaacagacttcacagatgaggat
gatctgattgagagggagctagaagatggcattgaactagctgttgagagcgagaagagc
aggtctaaaagagagcagaactggtccagtgatgaatatgggcatcactctagaaatcag
gacgaggacggagacggcgaacatgaaacgaaatggcagtcgccattaaaaaatgaattt
gacaatgtagaagaaggggaagtgccaacttttgatgatacaggcaggtcatatcagtca
tcaaacattcgcaaaagaaaggctggaagcccgcttgacagatctgtggtgggaaagcgc
catgagtatatgacgtctgtatccaatcaacatgatcatgacaactttcaagaagataga
ggtnggctggtgaggctttcagaaaaggatcggaaaaaatatgttcaggaaaatgatgct
ttatgtgcctgctggatgaagattgtttccctacacaccaccaccaccaccagaagatgc
tctatgtatgttacaaagaatcagaactattga

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