Daucus carota (carrot): 108221811
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Entry
108221811 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108221811
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108221811
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108221811
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108221811
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108221811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Vpu
Motif
Other DBs
NCBI-GeneID:
108221811
NCBI-ProteinID:
XP_017251157
UniProt:
A0AAF0X7N8
A0A164ZL09
LinkDB
All DBs
Position
5:43351791..43362513
Genome browser
AA seq
1113 aa
AA seq
DB search
MLVRGDLGFVSLVVVVVVVVWVVLRRKWRTAVSRREEIRRLLVLAAEESARVEFEAKVQY
SSVAESVGFVEEERRKIKKPVQNQCALCLTPTKKLCSQCKAVYYCSGNCQIIHWRQIHKD
ECHQYAMFGKSNEDKLSSQKVFNEDVSHDDSYELDRRQYAEQVKTSLEKYTHAGDPDVLH
TKDEIEDVVIAEDVESNSSDTSHFFDGSSESTTTSSEASLDSSVSSMNDSDGLYGTRTVA
SIAVKSETLHANGDQSRSPVTEKSFHLEKSSIERGQNKPVCSDGDCGCASCTSSGQKIGG
SNDSLSDPATTSSGFWEGTIKSRRSRHDADDNCTRSSSSEYYNGIALGTEGHVSEAALLV
NLNKKASTSRMSTSLNVKTSTSMHADSVDSSIMKSRETKSSRSSDSCAKPDAIDRGHLVA
KDSKSTSSLPSLCSERLNKVSNDTIISSRASRSQKVGTMLCKDYDAGLTSSPGTDEDHKA
KWLNVDDGIPRVTTSLPQLPTVAANAKNGLKQTMLKVVDQLKPSKVSRHYSMGVGSEILG
KYTPKGLFSYEQFVKLYNWNKVEMQPCGLINCGNSCYANAVLQCLAFTPPITAYFLQQLH
SKTCQTKDWCFTCEFESLIVKAKEGNSPLSPIEILSHIGNIGSHLNYGKEEDAHEFLRCA
IDTMQSSCLKEATIKSSGSLNEETTLIGLTFGGYLRSKIKCMKCGGKSERHERIMDLAVE
IDGNISTLEEALRKFTCTEILDGENKYKCSRCKSYEKAKKKLTIIEAPNVLTIALKRFQS
GKFGKLSKSIKFPEVLNMTPFMSSTSDMSPIYRLYGVVVHLDIMNASFSGHYVCYVKNIQ
NKWFKIDDSSVNGVELENVLTKGAYMLLYARCSPRAPKLIRNSMVPRDPRKPKNISLSRS
NSTGACDSPRTDHLNYQSGQGFYRDHPSFRRVFSSPDDDSSSDNSSSLFSEAFSCSTESS
TKDSTSTDDYFDQIFGESGHNSWWNSSDSDTSSSSSPSPLYSKNMHWTSLDHIATRYNKG
SHYSTDCVEYAEDGHVWAKQPSNYSNVENLKGKGSVPVLYSDKVKHCRKLDRNSNCSSCR
ETNLDKVGKLNPLNSVKSGMSLRKSSRGKPDKD
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgagaggggatctagggtttgtgtccctagtggttgtggttgtggtggtggtt
tgggttgttttgaggaggaaatggcgaactgcggtgtcgagaagggaggagattaggagg
ttgttggttttggctgcggaggagtcggctagagtggagtttgaggctaaggtgcagtat
tccagtgtggcggaaagtgtggggtttgttgaggaggagaggaggaaaattaagaagccg
gtgcagaatcagtgtgcgctgtgcttgacgcctactaagaagctttgttcgcagtgtaaa
gcggtttattattgctctgggaattgtcaaattattcactggagacaaattcacaaagat
gaatgccatcagtatgccatgtttggcaagagcaatgaagataaactttctagtcagaaa
gtgttcaatgaagatgtgagccatgatgatagctatgagttggacagaaggcagtatgct
gagcaagttaaaacttctcttgaaaaatatacacatgccggcgaccctgatgttttgcac
acaaaggatgaaattgaagacgtagtaattgctgaggatgtggaatctaactcgtctgat
acttctcatttttttgatgggagttctgaatcaactactacctccagtgaagcttcactt
gattcttctgtttcgagtatgaatgattctgatggattatatgggactcggactgttgcc
agtatcgcagttaagtccgaaactctacatgccaatggggatcaaagcaggtcaccagtt
accgagaaatcattccatctggagaagtcatccattgaacgtggtcagaacaagcctgtt
tgtagtgatggagattgtggttgtgcgtcttgcacttcatctggtcagaagattggtggt
tctaatgattctctttctgatcctgctacaacctcctctggattctgggaaggaaccatc
aaatctaggaggtctagacatgatgctgatgataattgtactcgttccagttcaagtgaa
tattataatggtatagcattggggacagaggggcatgttagtgaagctgccttattagta
aatttaaataaaaaggcttcaacttccagaatgtcaacatcattgaatgtaaaaacgtct
acaagtatgcatgctgactctgttgattcatcgattatgaagtctagagagactaagtct
tcccgatctagcgattcttgtgctaagccagatgccattgatagagggcacttagtagct
aaagactctaagagcactagtagtttgccctcattgtgctcagaaagattaaacaaagta
agtaatgatacaattatctcttcacgtgcttcgagatctcagaaagttggaactatgttg
tgcaaggattatgatgcgggcttgacatccagccctggcacagatgaagatcacaaggca
aagtggttaaatgttgatgatggtattcctagggttaccacttctttgccccagttgcca
actgttgcagcaaatgctaaaaatggtttaaaacaaacaatgttgaaagttgttgaccag
ctcaagccttccaaagtttcaagacactattcaatgggggttggtagtgagattctggga
aaatacactcccaagggcctgttttcgtatgaacaatttgttaagctttacaattggaac
aaagttgaaatgcaaccatgcggcctcataaattgcgggaacagttgttatgcgaatgct
gtgctccagtgcttggcatttacaccacctatcactgcttatttccttcaacagctccat
tccaagacatgtcaaactaaagattggtgttttacctgtgaattcgaaagtctgattgta
aaggcgaaggaaggaaattctccactatctccaattgaaatactttcccatattggtaac
attgggagtcatcttaattatgggaaagaagaagatgcacacgagtttctaaggtgtgcc
attgatacaatgcaatcgtcttgtcttaaggaagccactataaaaagctctggctctttg
aatgaagaaactactcttataggcctcacatttgggggttacctccggtccaagataaaa
tgcatgaaatgtggaggcaagtctgagcgccatgagagaataatggacctcgctgttgaa
atagatggaaacatatctaccctagaagaggctctacggaagtttacatgtactgaaatt
cttgatggtgaaaacaagtacaaatgcagcagatgcaaatcttacgagaaagctaaaaag
aagttgaccataatagaggctcctaatgtcctgaccattgcattgaagaggtttcagtca
gggaagtttggaaaacttagcaagtctatcaagttcccagaggttttaaatatgacccca
tttatgagctcaacaagtgatatgtctccaatatacagactttatggagtggtggttcac
ttggatatcatgaatgcctcattttctggtcattatgtatgctacgttaaaaatatccaa
aacaaatggttcaagattgatgatagttcggtaaatggggtggaacttgagaacgtcttg
accaaaggagcatatatgcttctttatgcgaggtgttctccacgggctccaaagttaata
agaaactcgatggtacctcgtgatccaagaaaaccaaagaatatatcgttgtcaagatcg
aactccacaggtgcatgtgattctcctagaacagatcatttaaattatcagtctggtcaa
ggcttctatcgagatcacccaagtttccgacgggttttttcctcaccggatgatgattca
tcaagtgacaattcttcctcattattctccgaggctttttcatgcagtaccgaaagcagc
acaaaggattccacgagcactgatgactattttgatcaaatattcggtgaatctggacac
aactcctggtggaattcatcagactctgacacctcatcttcttcatctccctcccctttg
tactccaaaaatatgcactggaccagcttggatcatattgctacgagatataacaaaggg
agccactattcaactgattgtgtcgaatatgctgaggatggtcatgtttgggcaaaacaa
ccaagcaactatagcaacgttgaaaatttaaaaggtaaaggaagtgtccccgttttgtat
tctgacaaggttaaacattgtagaaaattagataggaacagtaattgtagtagttgtagg
gaaactaacttagacaaagtaggaaagctcaaccctttgaatagtgtaaagtctgggatg
tctctcagaaaatctagtagaggaaagccggataaagattaa
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