Daucus carota (carrot): 108221885
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Entry
108221885 CDS
T05350
Name
(RefSeq) ribonuclease TUDOR 2-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
108221885
NCBI-ProteinID:
XP_017251227
LinkDB
All DBs
Position
5:2274159..2278841
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AA seq
869 aa
AA seq
DB search
MASKAMAKPMLRGVVKAVPSGDTMVIMEMGNKAPEIPVERTVILSSLTAPRLARRGRQQT
TDEPFSWQSREFLRKLCIGKEVGFQIDYTLPRKGLEFGTVFLGDKNVACWVVAQGWAKVR
EARESEKDKGECSPHLKMLRNCENMAINQGFGLWSKAAGAVRDLPPSAVDDPDNLDAEAF
LDGNKGRPVEAIVEYVPNGSTLLVYLLPDYEHVRVFVAGVQAPLLRNRNAEPEKADGYGK
TSNGTANGKTPNGTRGPLKSAQNVATSSAPVTKDAPDTYGRESKHFTELRVLHRNVRIVF
EDYDRTALIGSVYYQDGELIKDLAVQLLENGLAKYVEWSASFLQDKVRLQLKNSELAAKN
NRLRMWNNYMPPPTTSQAIKDQNFTGKVVEVASGDCIVVKVDSLPVTSSAAGRRVYLSSI
RCPRLVNGRNEDRGKVSFYAREAREFLKKHLYGRQVHVSMEYSRKVNTAEGPEERVMEFG
SVFLESQSESTEDVLLALPTAGSQHHRTNIAELMVARGFAEVIRHREFEVRSNYYDALVD
AECRAKVAKEGMHSDKKYGEKQAVSNGQAIRRTQKKESQIRESSVNGQEVSSTQAIKRTP
KEEFQVVVKEVLGGGRFYVQTAADQKEASIIQQKLASLKLREAPAIGSFKYNKGDLVIAQ
FSQDNCWYRAMIVNVPQGAIRSAKAKYEVFYIDYGTQEFVAYSRLRPTDCYSVPSSPGLA
QLCSLAHVKVPSWEEDHGKEAAHCLSDHILNRQQLKAIVEERDTSGGEARGHGTGTNLIV
TLMDAKANISINAVMLKKGYARVDKTRREDAAAEQTTEEVKPCREDAAVKQTIKKLEAYQ
VKAKKERIGMWENGDIISDDDDENEKSSC
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaagctatggctaaaccaatgttgagaggggtagtgaaagctgttccatcc
ggtgatactatggtgatcatggagatgggaaacaaggcaccggagatccctgtggagagg
accgtaattttatcatcacttacggctccgagattggctcgcagaggtagacagcaaact
acagatgagccattttcatggcaaagcagagagtttctaagaaaactttgcattggaaag
gaagttggtttccaaatagattacactttaccacgcaaagggcttgaatttggcaccgtt
tttcttggtgataaaaatgttgcatgctgggttgttgcacaaggctgggcaaaggttagg
gaggcaagggagtccgagaaagataaaggtgaatgtagtcctcatctaaagatgctcaga
aattgcgaaaatatggcaataaatcaaggttttggtctttggagcaaggcagcaggtgct
gttagggacctccctccttctgcagtcgacgatccagataacttagatgcggaggccttt
ctagatggaaacaaagggaggcctgtggaagctattgttgagtatgttccgaatggaagc
actctccttgtttatttgcttccagactatgagcatgtccgagtgtttgttgctggagtc
caggcaccacttctgagaaatcggaatgctgaacctgaaaaggccgacggatatggaaaa
acttctaacggaactgcaaatggaaaaactcctaatggaactcgtggtccattaaaatca
gcacagaatgtagctacatcatcagctcctgtaacaaaagatgctcctgatacatatggg
agggaaagcaaacattttactgagcttcgtgttttacatagaaatgtgcgcattgtcttt
gaggattatgacagaacagccctgattggatcagtatattatcaggatggtgaattgatt
aaggacttggctgtgcagcttcttgaaaatggtttagctaaatatgttgaatggagtgct
tctttcttgcaagataaggtcaggctacaactaaaaaattctgaacttgcagcaaagaac
aaccgattgagaatgtggaacaactacatgccaccgcctactacttcacaggctatcaaa
gaccagaacttcactggaaaggttgttgaggtcgcaagtggagattgcattgtagtaaag
gttgattctctaccagtcaccagttcagcagcagggaggcgagtctatctctctagtatt
aggtgtcccaggcttgtcaatggtcgtaatgaagacagaggaaaggtttctttctatgca
cgtgaagcgagggagtttttgaagaaacatctatatggccgtcaagtgcatgtatcaatg
gaatattctaggaaggtaaatactgcagagggacctgaagaacgggtaatggaatttggt
tcggtctttcttgaatcacaatcagaaagcactgaagatgtcctgttggccctacctact
gctggcagccagcatcacaggacaaacattgctgaattgatggttgcccgtggctttgct
gaagtgattagacatagggaatttgaagtgagatcaaattattatgatgcacttgttgat
gctgaatgtcgtgcaaaagttgcaaaggaagggatgcactctgataagaagtatggtgaa
aaacaagctgtttctaatggtcaagctatcagaagaacacagaaaaaagagtcacagata
cgggagagcagtgtaaatggacaagaagtttctagtactcaagctatcaaaagaacacca
aaagaagagttccaggttgtggttaaagaagtcctaggtggtggaaggttctacgtccaa
acagccgcagatcagaaagaggcctctatcattcaacagaaacttgcctctttgaagctc
cgagaagctcctgcaattggttcattcaagtacaacaagggtgaccttgtcattgcacag
ttcagtcaagataattgctggtacagagcaatgatagtgaatgttcctcaaggtgccatt
cgatctgcaaaggctaaatacgaagtgttctacattgactacggaactcaggaatttgtt
gcttacagtcgtctgcgacctacagattgttattctgttccatcatcaccaggccttgct
caactatgcagcctagctcatgtcaaggtcccgagctgggaagaggatcacgggaaggag
gcagcacactgtcttagcgatcacatactaaacagacagcagttgaaggccattgttgag
gaaagggatacctctggtggagaagctaggggacatggcactgggactaatcttatcgta
accttgatggatgcaaaagctaacataagtatcaatgctgtcatgctcaagaaaggatat
gctagggtagataagacgagacgggaagatgcagcagcagaacagacgactgaggaggta
aaaccatgccgcgaagatgcagcagtaaagcagacaattaaaaagctggaagcataccag
gttaaagcaaaaaaagagagaataggcatgtgggagaacggagatattatctcagatgac
gatgacgaaaatgaaaaatcctcttgttag
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