Daucus carota (carrot): 108221945
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Entry
108221945 CDS
T05350
Name
(RefSeq) protein CNGC15c isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108221945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108221945
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108221945
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF8809
Motif
Other DBs
NCBI-GeneID:
108221945
NCBI-ProteinID:
XP_017251300
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All DBs
Position
5:38605012..38608582
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AA seq
623 aa
AA seq
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MRSSKAKALLSAIREDYERAKKKKMDPQGPISRRWNNIFLVACLISLFADPMFFYLPVVK
ENLCIDTGTTLEVILTIVRSLNDAFYMIQIYVRFRTAYEAPSSRVFWRGELVTDYWLIAK
KYLFKDFWIDLIASLPLPQVLIWIVIPSLSGSTMANTRDVLKFIIIFQYLPRLFLILFPL
SAKIAEVTGSVTETAWAGAAYNLLLYMLASHFVGACWYLLSIDRQEACWRSVCNLSELCK
NDYFDCHKANDAVRSNWFKSSKIKSICNPRASSYPFGIYGDAVTKYVTTSRFCNKYFYCL
WWGLRNLSSLGQGLGTTTYAGEICFAVIIAVLGLLLFALLIGNMQTYLQSTTVRLEEWRM
KKTDTEQWMRRRQLPEDLRQRVRKYNQYKWVALRGVDEEALLKDLPPDLRRDIKRHFCYD
LVRRVPLFDQMDELMLEAICLRLKPVLFTKHTFLVYEGGLVDEMLFIIRGKLLSCTTNGG
QSGFFHSFGIGPGDLCGEELLTWAFDPRPSVIRPSATHSVQATSEVEAFALIAEDLKVVA
SRFGRLHSKQLRPKLRHSHQWRTWAACIVQAAWRSYRIQKITAELKAKESLRTVAALTED
MKVHSDKNVPSPSSGFSICVQQG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagatcctcgaaggccaaagcactcttaagtgccatccgggaagactatgagagggca
aagaagaagaaaatggatcctcaaggtccaatcagtcgtagatggaacaatattttctta
gtagcatgtttaatttctttgtttgccgaccccatgttcttttacttgcctgtagtcaaa
gaaaatctttgcatcgatactggcacaacccttgaagtgattcttactattgtcaggtca
cttaatgatgccttttacatgattcaaatatatgtaaggtttcgtacagcttatgaggca
ccttcttcccgtgtcttctggcgaggagaactagttactgactactggctgatagccaag
aagtatttatttaaagatttttggattgatttgattgcttcactgccccttcctcaggta
ctaatttggattgttataccaagcttgagtggttcaacaatggccaacacgagagatgtc
cttaaattcattatcattttccagtacctccccagactatttcttatattatttccatta
tcagctaaaattgccgaagtcacaggttctgtgacagaaacagcatgggcaggagccgcg
tacaacttgttgctctatatgttagctagtcattttgtaggagcttgctggtatcttcta
tctattgacagacaagaagcatgctggagaagcgtttgcaatctcagtgaattatgtaaa
aatgattactttgattgccacaaggctaacgatgctgtaagaagtaattggttcaagtcg
agcaaaatcaagtctatatgcaatccaagagccagctcttatccatttggtatctatggc
gatgcagtgaccaaatatgttacaacttcgcgattctgtaacaaatatttttattgcctt
tggtggggcttgaggaacctcagttctctggggcaaggtcttggtacaaccacgtatgcc
ggggaaatatgttttgctgttatcattgcagttctgggattacttctcttcgcgttgctt
attggaaatatgcaaacatatctccagtcaaccacagttcgattagaggaatggagaatg
aagaaaacagatacagaacaatggatgcgtcggaggcaactgcctgaggacttgagacag
cgtgttaggaaatacaaccagtataagtgggttgctcttcgaggagtcgatgaagaggct
cttctgaaagatctcccaccggatcttaggagagatataaaacgacacttttgttacgat
cttgttcgacgggttccactgtttgatcaaatggatgaattaatgctagaagccatatgt
ctgaggctcaagcctgtcctgttcaccaaacacactttcctagtgtacgagggaggactc
gttgatgaaatgttgtttataatccgagggaagcttctttcttgcacaacaaatggtggt
cagagtggcttctttcattcttttggtattggtccgggagatttgtgtggggaagaattg
ctaacatgggcctttgatcctcgtccaagtgtcattcgtccgtcagccactcactcagta
caagccacttctgaagttgaagcctttgctctcatagctgaagacttaaaagttgttgcc
tcccgatttggaagactacacagcaaacagcttaggccaaaactccgacattctcaccag
tggcgaacgtgggctgcatgcattgtacaagcagcatggcgtagctacagaatacagaaa
ataactgctgaactcaaagctaaagaatccctgcggactgtagcagctctgacagaagat
atgaaagtacattcagacaaaaatgtgccctcgccctcatccggattctcaatatgtgtg
cagcaaggttga
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