Daucus carota (carrot): 108222027
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Entry
108222027 CDS
T05350
Name
(RefSeq) meiotic recombination protein SPO11-1-like isoform X3
KO
K10878
meiotic recombination protein SPO11
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108222027
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108222027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
108222027
NCBI-ProteinID:
XP_017251400
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All DBs
Position
5:complement(40425031..40431450)
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AA seq
371 aa
AA seq
DB search
MEGNNSISRPSDMLIRIRDFTRSIIKGMCKEQSSFVVHIDRFRNYCTDSSGHCCCSSYTA
KGKELITLQRECHVHRLDVLLRVLLIVQQLLQENKHGSKRDIFYMHPSVFREQSVVDRAI
NDICILLQCRHNLNVVSVGKGLVMGWLRFSEAGRIFDCINSPNSAHPVPVNVEEVKDIMS
VAKYILIVEKESVFQRLSNDQFCKKNQCIVITGRGYPDVPTRRFLRLIIEKLCLPTYCLV
DCDPYGFDILTTYRFGSMQMAFDAKFLRISNIQWIGVFISDVDRFSLPQHCLLPLTNEDK
SRTEALLRRCYLEREVPEWRLELELLLQRGVKFEIEALSAHSLSFLSEVYVPSKLKAEPS
IQQLGSATQTK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaacaattcaatctcgcgcccgtccgatatgttgatcagaatcagagatttt
actcgatcgataatcaaaggtatgtgtaaggaacaatcttcttttgttgtgcacattgat
cgattcagaaattactgcacggactcttctggtcactgttgctgcagttcttatacggcc
aagggaaaggagcttataacactacaacgtgaatgtcatgttcatcggctggatgtcttg
ctaagagtgctgctgattgttcagcaacttctgcaagaaaacaagcatggctcaaagagg
gatatattctacatgcatccatctgtatttagagaacagtcggtggttgaccgtgcaatc
aatgacatctgcatccttctgcagtgtcgccacaatctgaatgtagtgtctgttgggaaa
ggattggtgatgggatggctaagattctcagaagctggaaggatatttgattgcattaac
agtcccaattctgctcatcctgttccggtgaacgttgaagaagtaaaagatatcatgagt
gttgccaaatatatattgattgtagagaaagaatcagtttttcagcgactatccaatgat
cagttctgcaagaaaaatcagtgcattgtcatcacaggaagaggttatccagatgttccc
acaagaaggtttctgcggctcatcattgaaaagttgtgcctgcctacatattgtttagtg
gattgtgatccatatggctttgacatcttgactacatatcgatttggttcaatgcaaatg
gcatttgatgcaaaatttctacgtataagcaatatacaatggattggagtatttatttct
gatgtggatagatttagtcttccgcaacactgtctacttcctttgaccaatgaagacaag
tcgagaactgaagcattgttgcgtagatgttacttggaaagagaagtgccagaatggagg
ttggagctcgagttgttgctgcaaagaggagtcaaatttgagattgaagcattgtcagca
cactcactttctttcttgtcagaggtttatgtgccatctaagcttaaagctgaacccagt
atacaacaactcggatctgcaacgcaaacaaaatga
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