Daucus carota (carrot): 108222131
Help
Entry
108222131 CDS
T05350
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
dcr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108222131
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108222131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108222131
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108222131
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108222131
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108222131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
PQQ
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
108222131
NCBI-ProteinID:
XP_063949123
LinkDB
All DBs
Position
5:32714834..32716503
Genome browser
AA seq
387 aa
AA seq
DB search
MKNLSTSQHHSLLTTSSTIRQGQNQGLLLQEDQERARCDWDFALSTVVSNSSSVIGPVSD
ALGVTEFDPSDTFLATGGIARKIRIYNSENLLSNERSDQGVTFLDHASACDYYICTPAKL
SSLRWKPGSGSRIIGSGDYDGVVMEYDLERKIPVFERDEHGGRRVWSMDYSHWNPTIGAS
GSDDGSMQVWDPRCEGGNCVAKVHPSVTRSPVCCVEFNPFGGSSIVVGCADHVIYGYDVR
IMSHPVMTLQGHDKTVTYARFMDPHTLVTSGTDGCLKMWDTDEPSRLVRTYRGHVNCRRF
IGLSVWRSGGLICCGSENNQVFVYDRRWGEPIWVHELEGVKCEGGTDGFVSSVGWRQVGE
DECTLVAGGSDGVLQVFVGKRRNMPIL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttatctacttcacaacaccattctttattaacaacctcttcaacaattagg
caaggccaaaaccaaggactgctactacaagaagatcaagagcgagctaggtgtgactgg
gatttcgctctctccactgtggtttccaattctagctcggttatcggacccgtgtccgat
gccctcggcgtgacagaattcgatccctccgatacgttcctggctaccggagggatcgcg
aggaaaattcgaatttataattcggaaaatttgttgagtaacgaaagaagtgaccagggt
gtcacatttcttgatcatgctagtgcatgtgactattacatatgcactcccgctaaattg
agtagtttgagatggaaaccgggttcgggttctcgaattatcgggtcgggagattacgac
ggagtcgttatggagtacgatctcgagagaaaaataccggtgttcgaacgtgacgaacac
gggggtaggcgggtatggagcatggattattcgcattggaatccgacaataggcgcgtcc
ggttcggacgatggttccatgcaagtgtgggacccgcgttgcgaaggcgggaattgtgtg
gctaaggtacatcctagtgtaacacggagtcccgtttgttgtgtcgagtttaatcccttc
ggtggatccagcatagtggtcggatgcgccgaccacgtaatctacggctacgatgttcgc
atcatgtctcaccctgtaatgaccttacagggccacgataaaaccgtgacctatgcgcgc
ttcatggacccccacacccttgtcacgtccggcacagacgggtgcctcaaaatgtgggac
acggacgagccttcgcggctcgtccgtacctacagaggccacgtcaattgccggagattt
atcggattatcggtgtggagaagcggtggattaatatgttgcggttcggagaataatcaa
gtgttcgtttatgatagacggtggggcgagccaatatgggtgcatgagctggagggtgtg
aaatgtgagggtgggaccgatgggttcgtcagtagcgtgggctggaggcaagtgggtgaa
gacgagtgcacactagtggctggtggatcagatggtgttttgcaagtgttcgtgggcaaa
aggagaaatatgccaattttatga
DBGET
integrated database retrieval system
