Daucus carota (carrot): 108222159
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Entry
108222159 CDS
T05350
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108222159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108222159
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19-related factors
108222159
Complex C
108222159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Lipoprotein_9
Motif
Other DBs
NCBI-GeneID:
108222159
NCBI-ProteinID:
XP_017251554
UniProt:
A0A164ZM19
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Position
5:43770169..43771980
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AA seq
469 aa
AA seq
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MKILKDEMEEQEDDDDTDERKEIEDKTMLETKMALEKIVNARLSRISSATKSCIKYKPSQ
RCSSAFNSGAKERIIRMVEMPVDQLEPPKLKHKRRVPKANGSSPPVPVMQSPPRPVTVKD
QQDWKIPPCVSNWKNSKGYMIPLDKRLAADDGRGVEEVQINDNFAKLSEALYVSEQKARE
GVAMRSKVQKEMMLRDKEKKEQELRKLAQIARSERTSAAAADKCMVDVDDMRGRDNDNGR
ERGAARETKEEREDRLRREKIREERRCEREIERRLEAKDAAMGKKSKITRDRDRDVSEKV
ALGMATTGGARGGQVMYDTRLFNQDKGMASGFGTGDQYYNVYDKGLFTAQNTLSTLYRPK
KDADADTYGGEDHEQLDKIMKTNRFKPDKSFTGTSDKTGPRDRPVEFDKEPEEADDPFGL
DQFSTQVKKGKKALDKVGGSGTMQARAGSSMRDGNEGGRSRVGFEKGQH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttgaaagatgagatggaggaacaagaggatgatgatgatactgatgagaga
aaagagattgaagataagaccatgttggagactaagatggccctggagaaaattgtgaat
gctaggttgagtagaatatcgtcggccacaaaatcatgtatcaagtacaaaccttcacag
cggtgttcttctgcttttaattctggtgcaaaggaaaggattattaggatggttgagatg
ccagtggaccagctggagccaccaaagttgaagcacaagaggagggttcctaaggctaat
ggttcttcaccccctgtgcccgttatgcaatctccgcctcgccctgtcactgttaaggat
cagcaggattggaaaatcccaccatgtgtatctaattggaagaattcaaaaggttatatg
attccacttgataagcgtctggcagcagatgatggtagaggtgttgaggaggttcagatt
aatgacaactttgcaaagctctcagaagctctgtatgtgtcagaacagaaggcaagagag
ggtgttgctatgcgatcaaaggttcaaaaggaaatgatgttgagagacaaggagaagaag
gaacaagaattgagaaaactagctcaaatagctagatcagaaagaactagtgctgctgct
gccgataagtgtatggtggatgttgatgacatgagaggccgagacaatgataatggcaga
gagaggggtgcagcaagggagacaaaggaggaaagagaagatagactgaggagagagaag
atccgcgaggagaggcgctgtgagagggaaatagagagaagattggaagcaaaggatgct
gcaatggggaagaaaagtaagattaccagagacagagatcgtgatgtcagtgaaaaggtt
gcacttggaatggcgactactggaggagcacgaggtggtcaagtcatgtatgatacacga
ttgttcaaccaagacaagggcatggcctcaggctttggaactggtgaccagtactacaac
gtgtatgacaaggggttgttcactgcccagaatactctttcaactctttacaggccaaag
aaagatgcagatgctgatacatatggcggtgaagatcatgagcagctagacaagataatg
aagactaatagattcaaacctgacaagtcatttaccggtacatctgacaaaactggccca
agggacaggcctgttgaatttgacaaggaaccagaagaagctgatgatccatttggtctg
gatcagttttcgacccaggtcaagaagggtaagaaggccttggacaaggttggaggcagc
ggtacaatgcaagctagggctggatcttctatgcgagatggcaatgaaggtggtcgcagt
agagttggctttgaaaaaggtcagcactag
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