Daucus carota (carrot): 108222366
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Entry
108222366 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108222366
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108222366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108222366
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108222366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
108222366
NCBI-ProteinID:
XP_017251773
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All DBs
Position
5:6867896..6880165
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AA seq
307 aa
AA seq
DB search
MDEGLVRRATTGSTPNEELNGRERQKRVIEQLVLDLGNRGIREDALRELSKVFIQSRELI
KDLAPFVWNSFGTITALIQEIISIYRFLSPPNLTVVQSNRVCHALAVLQCIASHPETKML
FLKAHIPFYLYPFFNTTNKSRPFEHLRLTSLGVIGELVKVDDTEVISFLLSTEIIPPCLR
SMEMGSELSKTVATFIVHKILTDDVGLEYICTTAERFCSLRRVLANMVAALAEPPPSQLL
KHIIQCYLRLSDNRRACEALRGCLPDMLKDTRINSYLQDDPTTRRGLQQLLINVQGPHVA
QQAGGGF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggattagttagacgagcgacgacaggatcaacgcccaatgaggaattaaat
ggaagagaacgtcaaaaacgagtgatagaacagcttgtgttggatttgggaaatcgaggc
attcgagaagacgctcttcgtgagctttcaaaggtctttattcaaagcagggaactaatt
aaagatttggctccttttgtatggaactcttttggtaccattactgcactgattcaggag
attatttcaatctaccgtttcttatcaccgcctaatctgaccgtggtacaatcaaacaga
gtctgccatgcacttgctgttctccaatgtatagcctctcatccagagacaaaaatgttg
ttcttaaaagctcatattcctttctatctatatccttttttcaacaccacaaacaaatca
aggcctttcgagcatctgaggcttactagtttgggggtcattggtgaactggtgaaggtt
gatgatactgaggttataagttttctgttatcaactgaaattattccgccatgcttgagg
tcaatggagatgggtagtgaattatccaaaacagttgcaacatttatagttcacaagatc
ttaactgatgatgttggcctcgagtatatatgcacaacagctgagagattttgttccctg
cgtcgagtcttggcgaacatggttgctgctcttgcagaaccaccaccatcacagctactg
aagcatatcattcagtgctacttgcgattatcagataatcgaagagcatgtgaagccctg
agaggttgccttccggacatgcttaaggatacgagaattaacagctacttgcaggacgac
ccaactacaaggcgagggctacagcagttgctcattaatgttcaagggcctcatgttgca
cagcaagcaggtggaggattctag
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