Daucus carota (carrot): 108222404
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Entry
108222404 CDS
T05350
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108222404
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108222404
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108222404
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108222404
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108222404
03009 Ribosome biogenesis [BR:
dcr03009
]
108222404
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108222404
04131 Membrane trafficking [BR:
dcr04131
]
108222404
03051 Proteasome [BR:
dcr03051
]
108222404
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108222404
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108222404
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108222404
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108222404
Complex C
Prp19-CDC5 complex
108222404
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108222404
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108222404
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108222404
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108222404
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108222404
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108222404
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108222404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
YjeF_N
FGGY_C
Motif
Other DBs
NCBI-GeneID:
108222404
NCBI-ProteinID:
XP_017251809
UniProt:
A0A161XS07
LinkDB
All DBs
Position
5:27106621..27109117
Genome browser
AA seq
626 aa
AA seq
DB search
MAQPQEPAIGIDLGTTFSCVGVYQHGRVEIIANDVGNRTTPSYVAFTDEELLFGEAARKQ
APMNPVNTIFDAKRLIGRRFTDSSVQKDMKHWPFEVVGDSANKPKIVVNEKGKEKQISPE
ELSSMVLTKMKEIAETYLGKTVKNAVVTVPAHFNDSQRRATKDAATIAGLNVLRILVEPT
AAAVAYGLDKKLTSGSAGERIVLVFDLGGGTFDVSLLKIKKKNFEVLATDGNSHLGGEDF
DNRLVDYFLKDFKRKHEKDISNNAKSLRRLRNACEEAKRFLSTVQVTAIEIDSLYEGIDY
RERITRAKFEELNKDLFNSCLKTVKNCLKAAGMGKDRVHDIVLVGGSTRIPKVQQLSKNF
FNGKELCQGINPDEAVAYGAAVQAAVLNGEKKFNIRSMELLDVTPLSLGIDVKGGVMSTV
IPRNTKIPATKEMEYVTSGDQQESICFLVYEGERSNSKDNNLLGEITLDGLPRAPRGEVE
VLVTFTVDPDGVLDVTAECKIAGVKANTTITSQGRLTKEEIERMIKDAKKYRTADEAFKR
KAMAMNALEEYAYDKRSAIKADGSLGRVAQRKVEKAIKEAIHWVNANKSATVAEYDSKKR
ELESICDSIIASDNYRRKKIKVEVVD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccgcaggaaccagcaattgggatagatctaggaacaacattttcatgtgtt
ggagtttatcaacatggtcgagtagagatcattgcaaatgatgtgggtaacagaactaca
ccctcatatgttgctttcactgatgaggagcttctctttggtgaagctgctcgaaagcaa
gctcccatgaatcctgtcaataccatctttgatgctaaaaggttgatcggaaggagattc
actgattcatcagtacaaaaggatatgaagcactggccttttgaagtagtgggtgattct
gctaacaaacctaaaatagttgtgaatgaaaaaggtaaggaaaaacaaatctcacctgag
gagctgtcgtcgatggttctcactaagatgaaggaaattgctgaaacctacttaggaaag
actgttaagaacgctgttgtcacagtccctgcacactttaatgactcacagcggcgggct
acaaaagatgctgcaacaatagcaggcctgaatgttctgcgtattcttgtggagccaacc
gctgctgcagttgcttatggtcttgacaagaagcttacaagtggttcagcaggggagaga
attgtccttgtttttgatcttggtggtggtacttttgacgtttctctgctcaaaattaaa
aagaagaattttgaagtgctggctactgatggcaacagtcaccttggaggcgaggacttt
gacaatcgtttagttgactattttcttaaggattttaaaagaaagcacgaaaaagacatc
agtaacaatgctaaatctttaagaagattgagaaatgcttgtgaagaggcgaaaagattt
ctctcaactgttcaggtgacagctatcgaaatagactctctctatgagggaatagattac
cgcgaaagaattactcgtgccaaatttgaggagttgaacaaggatctgtttaacagttgt
ttaaagactgtgaagaattgcctgaaagctgcagggatgggcaaggatagggtccatgat
attgttcttgtgggtggatctactagaattcccaaagtgcagcagctatcaaagaatttt
ttcaatgggaaggagctttgccagggtattaatcctgatgaggctgttgcttatggtgca
gctgtgcaagctgctgtactgaatggtgagaaaaaatttaatattagaagtatggaactg
cttgatgtaactcctctttcacttgggattgatgtaaagggtggagtaatgagtactgtc
attccaaggaacacaaaaattccagccaccaaggaaatggagtacgttacatccggagat
caacaagaatctatctgttttttagtttacgagggtgagagatcaaattcaaaagataac
aacttactgggtgagataacacttgatggcctccctcgtgcaccgaggggagaagttgaa
gttttagtaacatttaccgttgatccagatggggttctagatgttactgcagagtgtaag
attgctggagtgaaggcgaatacaacaataaccagccagggaaggcttacgaaggaagag
attgagagaatgatcaaggatgccaagaagtatagaactgcagatgaggcatttaaaagg
aaagctatggcaatgaatgcgttggaagaatatgcatatgataagaggagtgccatcaaa
gctgatggtagccttggtcgagttgctcagagaaaagtagagaaagctatcaaggaggct
attcactgggttaatgcaaacaagagtgctacagttgcagagtatgattccaagaagagg
gaattggaaagtatttgtgattccatcattgctagcgataactacaggcgaaaaaagatt
aaggttgaggtagttgactaa
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