KEGG   Daucus carota (carrot): 108222542
Entry
108222542         CDS       T05350                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Module
dcr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108222542
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108222542
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Pectate_lyase_4
Other DBs
NCBI-GeneID: 108222542
NCBI-ProteinID: XP_017251944
LinkDB
Position
5:complement(33792334..33794290)
AA seq 425 aa
MARTREFKLTTTLLIALAISSIVVEAKPFHHFKDHLPVKLGLAGAPVAPGGEAVFVITNY
GAKPDGKSDSSMSFQKAWKDACNSNGPARVVVPAGTFKTGEIIFTGPCTAAPITFEVQGT
MLGSEDVSMYSQNQWITIEHVNNVIVTGPGTLDGLGASTWKLKDDSFGGGVRLPDSLVFF
ASNNSVAQNFASVNSKGFHIKVLQSVNVTVQNVTITAPGDSPNTDGVHVSRSENVNVLDS
TIGTGDDCVSIGAGNTNVTVARIVCGPGHGLSVGSLGKWQDETDLRGVTVTNCTLTNTTN
GARIKSYRQSPSLSASGIIFDDLVMNGVHNPIIIDQNYDSMNLQQGSNVKLSDIHFRNIR
GTSLTNVAVTLNCSSTFPCEGVELVDIDLSYAGAPSQDSLPVQSACQNVKPTVSGIMNPP
ACPAR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctcgaaccagggaatttaagctcacaactacattgttgatagctctagctatctct
tcaattgtagttgaagctaaaccattccatcattttaaagatcacctgccggtaaaatta
ggccttgctggtgcgcctgttgcaccaggaggcgaagctgtttttgttatcaccaactac
ggggcaaaacctgatggaaaatccgatagctcaatgtcgtttcaaaaagcatggaaggat
gcatgcaactcaaacggaccagcaagagttgttgtcccggcgggaacttttaagacaggg
gaaattatattcacaggaccatgcacagcagcgccaataaccttcgaggttcaaggaacc
atgttagggagtgaagatgtgagcatgtactctcaaaatcagtggatcaccattgagcac
gtgaacaatgtcatcgttactggccccgggactcttgacggactaggtgcatcgacatgg
aaactcaaggatgatagctttggtggtggtgtccggcttcctgattcgcttgtgtttttc
gcttcaaacaactcagtggcgcagaacttcgcctcagtaaacagcaaaggcttccacatc
aaggtgcttcaaagtgtcaacgttacggttcaaaatgtgacgatcaccgcaccaggagat
agcccaaacaccgatggcgtccatgtaagtcgttcagaaaatgtaaatgttctggattcg
acaattggaaccggcgatgattgtgtttctattggtgccgggaacaccaacgttaccgtc
gcaagaattgtatgcggccccggacatggacttagtgttggaagcctcggcaaatggcaa
gatgagaccgatttgagaggagttactgtcactaattgtacactgacaaatacaacaaac
ggagccaggatcaagagctatcgccagtcaccttcgctaagcgcctctggcattattttt
gatgatttagtgatgaacggtgttcacaaccccatcattatagaccaaaactatgactca
atgaacctgcaacagggatcaaatgtcaagctttccgacattcacttcaggaacattagg
ggtacttctctgacaaacgtcgcagtcactctcaactgcagtagtacattcccgtgtgaa
ggtgtcgagttggtggacattgatctctcatatgcaggggctcctagtcaagacagcttg
cctgttcaatccgcttgtcaaaacgtcaagccaactgtcagcggcataatgaacccccct
gcttgtccagcacgataa

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