Daucus carota (carrot): 108222704 Help Entry 108222704         CDS       T05350                                  Name (RefSeq) phytochrome A1   KO K12120   phytochrome A Organism dcr  Daucus carota (carrot) Pathway dcr04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:dcr00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     108222704 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PHY PAS_2 PAS GAF HATPase_c PAS_9 PAS_4 Motif Other DBs NCBI-GeneID:  108222704 NCBI-ProteinID:  XP_063942536 LinkDB All DBs Position 1:40645481..40649563 Genome browser AA seq 1125 aa AA seqDB search MSSSSHDQFSDMTKISPQAIQIVADANLDDYFDASGSSFDYASSAYATQQVLASRQTQDG DLKSAHRRYMQKGEMIQPFGCMLALDPRTLKVIAFSENAPEMLTMPSDDVSSLGGNIALH FGADLRTFFDAPGIVILHRAFSSKDPVHFNPILVRLKTSGRSFYAVVHAVAHAFIIDFEP VNTMEDPVSVAGPVNSYMLAQKGIKRLQCLPRGNMQKLCSAMVEEIFEITGYDRVMAYKF HEDEHGEVVAEITKPGLEPYLGLHYPATDIPQVARFLYMKNMVRMIYDCRAKLVKVVKDE NLQLDVVLISSTLRGPHSCHQLYMQNMNSLASLVMAVVVNELGKEEFDTSSLPGWKGKKL WGLVVCHNTTPKYVSIFLRNACHLLAKVFAVHISEQTGLESLILENSIMHTQTLLCDKLL HETPLGIVSRCPNMMDLIKCDGAVLYYENKFYKMGVTPSDFKMYDILTWISVLHPDSAGF ITDSLCGSVFPGHLSVSDGICGMAAVRISSKCVLFWFRNHTDAVLNWGGAKNEPGEIDDG SKMHPRSSFKAFKEVVKARSAPWKDIEISAIHSLQLALWNSLNHGENKVPSATAIQIKLQ SLNVQGMQNQTLIARMLQLMEKAMVPILSVDPEGLVNGWNTKLGELTGLDTSAAIGENLL RLIEESSVDTVKRVLGLALQVPTIFSLSGKEAKNFRFIIKTYGHRTRYGPAILRVNVFAI RDLLGHVVHLCFVTNNITSENIIVDKFIRRETGYKAIMQNIRSLNPPIFGPDEFCNCVEW NQAMTELSGWGREEVVGKMLLGEVFGTRAPLCRLKNEEALVNLGIALKTARYCQESESIS FGFFARSGRYIECLLRTNRRLNAEGEATGTFCFLQLASPKLMQVYQFQRMTDHTTDKTKE TIAYFKQQVNSSVSGILYTGKMLEGIDLNEEHKKSLHKCQLQLSEILDHTDIDSMIDGYV KLQVSEFKLHEVFVASMSQVMRRIMEKNIRMVNDYADDIMSVKLYGDALRLQQVLADFMS TCVGLAPYGGQLGVSARLINNTNSEDSVQPAVNFELRITHDGCEIPEDLMKQMLGSGAKS EDGMSLFVSRKIWKVMNGDVGYSREDGRSVWIISAKFAGAVQSDI NT seq 3378 nt NT seq  +upstreamnt  +downstreamnt atgtcatcttctagtcatgaccagttctccgacatgacaaaaataagtcctcaggctatt caaatagtagcagatgcgaacctagatgattactttgatgcatctggtagttcatttgac tatgcaagttcagcttatgctacgcagcaagttcttgctagtcgacaaactcaagacggg gatctaaaatctgctcaccgacgttacatgcaaaaaggtgaaatgatccagccatttggt tgtatgttagccctggatccgagaacattgaaagtgattgcattcagtgagaatgctcct gaaatgctgacaatgccttctgatgatgtttcaagtctcggtggcaatattgctcttcac tttggcgcggatctgagaaccttttttgatgctcctggaatagttatcctgcatagagct ttcagctctaaagatcccgtccattttaatcccatattagtccgtttgaaaacctctgga agaagtttttatgcagtggttcacgcagtagcacacgcttttatcattgactttgagccg gtgaatactatggaagaccctgtaagtgttgctgggccagttaattcatatatgcttgca cagaaaggaattaagaggttgcagtgtttgcctagagggaacatgcaaaaactttgttct gcgatggttgaagagatatttgaaatcaccggttatgacagggtgatggcctataaattt catgaagatgaacatggagaagtggtagctgagatcacgaagccaggccttgaaccttat ctgggattgcattaccccgccacagatattcctcaggtagctcgctttctctacatgaaa aatatggtccgtatgatctatgattgtcgtgcaaagcttgtgaaggtagtgaaagatgaa aatttacaacttgatgtcgtcttgattagttcaactttaaggggtcctcacagctgccat caactttatatgcaaaacatgaattcgcttgcttctctagtaatggcagttgtagtcaat gaattgggtaaagaagaatttgatacttctagcttaccagggtggaagggcaaaaaactt tggggactagttgtgtgtcataacaccaccccgaaatatgtttccatattcctccgaaat gcatgccatttgctggcaaaagtttttgcagtgcatatcagcgagcagacaggactggaa agccttattcttgaaaattccatcatgcacactcaaactctgttgtgtgataagctattg catgaaactccccttggtattgtgtcacgatgcccaaatatgatggatcttattaaatgt gatggcgcagtcttatactatgaaaataagttttataaaatgggagtcaccccgagtgac tttaagatgtatgatatactgacatggatcagcgtgcttcatccagattctgcaggtttt ataacggatagcttgtgtggttcagtgttcccagggcatctttctgtttcggatggcata tgtgggatggcagcagtgaggatatcttcaaaatgtgtgcttttctggttcagaaatcac actgatgcagttctgaattggggtggtgcaaagaatgaacctggtgaaatagatgatggc agtaaaatgcatcctcggtcatcttttaaagcttttaaggaagttgtgaaagccagaagt gcaccttggaaggacattgagataagtgcaatccactccttgcaacttgcgttatggaac tcgttaaaccatggtgaaaacaaggttccaagtgccactgcaatccagataaaacttcaa tccttaaacgttcaagggatgcaaaatcaaacacttattgccaggatgctccaactgatg gagaaagcgatggtgccaatattgtcagtagatccagaagggctggttaatggatggaac acaaaacttggtgaattaactggtcttgatactagtgcagccataggggaaaatttgctc aggctcatagaagaaagttcagttgatacagtgaaaagggtactagggcttgcgctgcaa gtacctactatcttttctctgtcagggaaagaagcgaaaaatttccggttcataattaaa acctatggacaccgaacacgttatggtccagctatcttacgagtaaatgttttcgccatc agagatcttcttggccatgttgttcacttgtgctttgtgacaaataatataacaagtgaa aacattattgtagacaaatttattagaagagaaactggctataaagctattatgcaaaat ataaggtcattgaaccccccaatatttggcccagatgaattttgtaattgtgttgagtgg aaccaagctatgacagagttatcaggatggggtagagaagaggttgtaggcaagatgctt ctgggggaggttttcgggacccgtgcaccattgtgcaggctcaaaaatgaagaggctttg gtgaatcttggtattgcactcaaaactgctcgctattgtcaagaatctgaaagtattagc tttggattttttgcacggagtggaaggtatatagaatgtctgctccgcacaaatagaagg ttgaatgcagagggtgaagctactggtaccttttgcttcttgcagctagcaagtccaaag ttgatgcaggtgtatcaatttcaacggatgacagatcacacaacagacaaaacaaaggaa acaatagcttattttaagcagcaagtaaacagttctgtatcagggattttatataccggg aagatgttggaaggaatcgatttgaatgaagagcacaaaaaaagtcttcataaatgccag cttcagcttagcgaaattcttgatcacacagatattgatagcatgattgacgggtacgta aagctacaagtgtcagagttcaaactccatgaagtgtttgtggcctctatgagtcaagtt atgaggagaatcatggaaaagaacattcgtatggttaatgattatgcggatgatataatg tctgtgaaattatatggagacgcactgcggctccaacaagtccttgcagatttcatgtca acctgtgttggccttgcaccctacggtgggcaactaggcgtgtcagctcgtttgatcaac aatactaattcagaggactctgttcaacctgcagtgaatttcgagctcagaataacacat gatggatgcgagataccagaagacttgatgaagcagatgttgggaagtggtgctaaatct gaggatggcatgagcctgtttgttagcagaaagatatggaaagtcatgaacggagatgtt ggatactcgagagaggatggtagatctgtgtggatcatatctgccaaatttgcgggagct gtccagtctgatatatga

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