Daucus carota (carrot): 108222816
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Entry
108222816 CDS
T05350
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00541
Biosynthesis of various nucleotide sugars
dcr01100
Metabolic pathways
dcr01250
Biosynthesis of nucleotide sugars
Module
dcr_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
108222816
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
108222816
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
108222816
NCBI-ProteinID:
XP_017252226
UniProt:
A0AAF1B1T8
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Position
5:26283392..26286790
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AA seq
670 aa
AA seq
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MTSYTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSRSAPNFK
FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGMQLPIHGDGANVRSYLYCEDVAEAFEVVLH
KGEVGHVYNIGTKKERRVTDVAQDICKLFSMDPQSNIKYVENRPFNDQRYFLDDQKLKNL
GWAERTTWEEGLKKTMDWYTSNPDWWGDVSGALLPHPRMLMMPGGNEKHFDGSDTRDSES
RFVNKSIASQASATNPKGIIPQKAAVKFLIYGRTGWIGGLLGKLCEKDGIQYEYGRGRLE
NRSQLLSDLQLVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVVGTLNLADICREQGLL
MINFATGCIFEYDAAHPEGSSIGFKEEDTPNFHGSFYSKTKAMVEELLKEYDNVCTLRVR
MPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVV
SHNEILEMYKNYIDPSFKWANFTLEEQAKVIVAARSNNEMDGSKLKTEFPELLSIKESLI
KYVFEPNKKT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgactagttatactcctaaaaatatccttataactggagctgctggcttcattgcatct
catgttgctaatcgtctcgttcggagctaccctgattacaagattgttgtgcttgataag
cttgactactgttcaaatctgaagaaccttaatccatctcggtcagctccaaacttcaaa
tttgtcaagggcgatatcggcagtgctgatcttgtcaactaccttcttatcactgagtcc
attgatactattatgcactttgctgcccagacccatgttgataattcttttggtaacagc
tttgagtttaccaagaacaacatttatggcactcacgtgcttttagaagcttgcaaagtg
actggacaaatcagaaggtttatccatgtaagtacagatgaggtctatggcgagacagac
gaggatgctgttgtgggtaatcatgaagcttcgcaactcctccctaccaatccatattca
gccacaaaagctggggcggaaatgcttgttatggcttatggcaggtcatacggcctacct
gttataacaactcggggtaataatgtgtatggtcctaatcagtttccggaaaaattgatt
ccaaagttcatccttttagccatgaggggaatgcaacttcctattcatggggatggtgcc
aatgtacggagttatctctactgtgaggatgttgctgaggcctttgaggttgtccttcac
aagggagaagttggacatgtttacaatatagggacaaagaaggagaggagagttactgat
gttgcccaagacatctgtaaacttttctccatggatcctcaatctaacattaaatatgtg
gagaacaggccattcaatgatcagaggtactttctagatgatcagaagttgaaaaacttg
ggctgggctgagcgcactacatgggaggaagggctgaaaaaaactatggattggtatact
agtaaccccgattggtggggagatgtatctggagcattacttcctcatccaaggatgctg
atgatgcctggtggaaatgagaaacactttgatggatctgatacccgtgactctgaatct
cgatttgtaaataaatctattgcatcacaggcatctgctacaaatccgaaaggcatcatc
cctcagaaagcggctgttaagtttttgatttatgggaggactgggtggataggtggtctg
cttggaaaattatgtgaaaaagatggaatccagtatgaatacggaaggggacgtctagaa
aatcgatcacaactattgtctgatctccagttagttaaacccacacatgtttttaatgct
gctggtgtgactggtagacccaatgtcgattggtgtgaatcccacaaaactgaaacaatt
cgtacgaatgttgttggcacactgaatttagcagatatatgcagagagcagggacttctg
atgattaattttgctactggatgcatattcgagtatgatgctgcacaccctgaaggttct
agcattggattcaaagaagaggacacacccaactttcatgggtcattttattcaaagacg
aaggccatggttgaagaactcttgaaagagtatgacaatgtctgcacgctccgagttcgg
atgcccatatcatcagacctcagcaacccacgcaacttcatcacaaagattagtcgttat
aataaggtggttaatattcccaacagtatgacagtcttggatgagctacttcctatctca
atcgaaatggctaagcggaacctcagaggcatatggaactttaccaatcctggagttgtg
agccataatgaaattctggagatgtacaagaattacattgatccatctttcaaatgggca
aacttcacactggaagagcaagctaaggtgatcgtagcagctcgaagcaataacgagatg
gatgggtctaagctgaagaccgagttccctgagttgctatcaatcaaagaatcattgatc
aagtatgtttttgaacctaacaagaaaacctag
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