Daucus carota (carrot): 108222845
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Entry
108222845 CDS
T05350
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
108222845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108222845
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
108222845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-GeneID:
108222845
NCBI-ProteinID:
XP_017252265
LinkDB
All DBs
Position
5:complement(7284576..7292368)
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AA seq
348 aa
AA seq
DB search
MESKATAQSSGRVRNCSICNQTKAALKRPKTLEQICRECFYQVFEDEIHRVIVDNHLFKP
GERIAIGASGGKDSTVLAYVMAELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
YGLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKVVTGHNA
DDIAETVILNILRGDIARLGRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFS
TECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCERCGYIS
SQKWCKACVLLEGLNRGLPKLGIGRRGIDNERNSRKSIDNKKCGSLDF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaggcaacagcgcagagcagcggccgggttcgtaattgctctatttgtaat
caaactaaggcggctctcaaacgacctaaaacccttgaacaaatttgcagggagtgtttc
tatcaagttttcgaagatgagattcatagagttattgtcgataaccatctttttaagcct
ggagaacgtatcgctattggagcttccggtggaaaagattcaactgtgcttgcttatgtt
atggctgaattaaatcgtcgccataactatggtctggatctctttctgttatccgttgat
gaaggaatcactggctacagggatgattcacttgaaacagtcaaaagaaatgagattcag
tatggcctcccattaaaagttgtttcgtataaagatttgtatggatggaccatggatgag
atagtaaagatgataggcttgaagaataactgcacattttgtggtgtcttccgccgccag
gccctggaccgaggtgctgccttgttgaaagtcgacaaagtagttacaggacataatgca
gatgatatcgcagaaacagttatcctcaatatattacgaggtgacattgcaaggctgggc
aggtgtacatccataactactggtgaagatggaccaattcctagatgcaagccttttaaa
tacacatatgagaaggagattgttatgtatgcgtacttcaaaaagctggactacttttcc
acagagtgtatttattctccaaatgcttatcgtggttttgctcgagagttcatcaaggat
ttagagagaatcagacccagagccatactagacatcattaaatcgggcgaggattttagg
attgctacttctacaaaaatgccagagcaaggaacatgtgaacgctgtggctatatatct
agtcagaaatggtgtaaagcttgtgttttactggagggactgaaccgggggttgccaaag
ctaggaattggccgcagaggtatagataatgaacggaatagtaggaagagcatagataat
aaaaagtgtggtagcttggacttttaa
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