Daucus carota (carrot): 108222853
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Entry
108222853 CDS
T05350
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108222853
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108222853
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108222853
03036 Chromosome and associated proteins [BR:
dcr03036
]
108222853
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108222853
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108222853
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108222853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108222853
NCBI-ProteinID:
XP_017252278
UniProt:
A0A164ZJQ1
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All DBs
Position
5:42914918..42920518
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AA seq
544 aa
AA seq
DB search
MIKQILGKLPRKTSSKSSSSKEGAFASANSSGLVSGVVGNTPKSNSASGKVLNTDSGASH
SSNGTHVSQPTSTSVKSNQGKKLGTMGSEKGQVNNNTVYEALPSFKDVPSSEKNNLFVRK
LNMCCIVFDFTDPSKNLKEKDIKRQTLLELVEYISSVTSKFNEITMLEITKMIAANLFRA
LPNHDNKLPYVYDPEDDEPTLEPSWPHLQIVYEFLLRFVASPETDAKLAKRYIDQSFLLK
LLELFDSDDQREREYLKTILHRIYGKFMVHRPFIRKSINNVFYTFIFETGHHNGIAELLE
ILGSIINGFALPLKEEHKHFLVRALIPLHKPKCISMYHQQLSYCITQFVEKDFKLADPVI
RGLLKYWPITNSSKEVMLLGELEEVLEATLAAEFQRCMVPLFQQIARCLSSSHFQVAERA
LFLWNNDHIRNLITQNRKVILPIIFPALENNTRSHWNQAVQSLTVNVKKIFSDADQVLFD
ECLSKFQEDQIREKETSEKRASTWKRLEDVAASNTGSNEALLDSSFASSVTVSTSTTSQA
KTGG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcagattttaggcaaacttcctcggaagacgtcgtctaaatcttctagcagt
aaggagggtgcttttgcgtctgctaactcgtcaggtttagttagtggtgttgttgggaat
actcctaagagtaattctgcttctgggaaagtacttaatacagattcgggagcttctcat
tctagtaatgggacacatgtttcacaaccaacgagtactagtgttaaatcaaatcaagga
aagaaactagggacgatgggttcggaaaaaggtcaagtgaataataatactgtttatgaa
gctttgcctagctttaaggatgttccaagctctgagaagaataatctttttgttaggaag
ttgaatatgtgctgtattgtgtttgattttactgatccttcgaagaatctgaaagagaag
gatataaagcgacagaccttgcttgagcttgtcgagtacatttcgtcggtgacgtccaag
ttcaatgagataacaatgctggaaatcacgaaaatgattgctgcaaatttgtttcgagca
ctgccgaatcatgataataaactaccttatgtatatgacccggaggatgacgaaccgact
ttggagccatcctggcctcatctccaaattgtatatgaatttcttttgagatttgttgct
tccccggagacagatgcaaaactagctaaaagatacattgatcagtcttttctgttgaaa
ttacttgaactctttgactcagatgatcaaagggaaagggaatacttgaagacaatcctt
caccgtatttatggaaagttcatggtgcaccgtccatttattagaaaatccattaacaac
gtcttctacacttttatatttgagacgggccaccataatggaattgcagaattgcttgag
atcttgggtagtattatcaatggatttgcacttcccttgaaggaagagcacaaacacttc
cttgtccgtgcactgattcccctacacaaacccaaatgcatatcaatgtaccaccagcaa
ctttcttattgcattacccagtttgtggagaaagatttcaagctggctgacccagtgatc
cgaggtctactaaagtattggccgataactaatagctcaaaagaggttatgctacttggt
gagctagaagaagttctggaagctaccctagcagccgaatttcaacggtgcatggtccca
ttgttccaacaaattgctcgctgcctcagcagttcacactttcaggtagccgagcgtgca
ttgttcctatggaataatgatcacataaggaatcttattactcagaatcgcaaggttata
cttccaataattttcccggcattggaaaacaacaccaggagtcattggaatcaagctgtt
cagagcttgacagtgaatgttaaaaaaatcttttccgatgcagatcaagtacttttcgac
gagtgcctatccaaattccaagaagatcagatcagggaaaaagaaacatcggagaaacga
gcatccacctggaagcggttggaagatgtcgcagcatccaacactgggagcaacgaggca
ttgctcgactctagttttgcttcctctgtcacagtatctactagcacaacttctcaagcc
aagacaggtggttga
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