Daucus carota (carrot): 108222957
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Entry
108222957 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108222957
KO
K26500
BOS complex subunit NOMO
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108222957
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
108222957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7152
CarboxypepD_reg
NOMO_8th
NOMO1-like_1st
Ig_NOMO
SdrD_B
NOMO_3rd
NOMO1-like_9th
EMC7_beta-sandw
CarbopepD_reg_2
NOMO_5th
NOMO1-like_2nd
NOMO_6th
Y_Y_Y
NOMO_12th
MetallophosN
bMG3
CooC_C
Motif
Other DBs
NCBI-GeneID:
108222957
NCBI-ProteinID:
XP_063948890
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All DBs
Position
5:complement(33517947..33536882)
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AA seq
1200 aa
AA seq
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MTILHHLLLIACIFISLNPIIPAIADSILGCGGFVEASSALIKSRKATDAKLDYSHITVE
LRTVDGLMKDRTQCAPNGYYFIPVYDKGSFVIKIKGPQGWSWDPIQVPVVVDHNGCNANE
DINFQFTGFTVSGRVVGAVGGESCSHKTGGPSSVTVELLHHPSGAVASSVLTSTDGSYSF
SNIIPGNYNVRAAHNDLPIEVKGSTEVELGFGNAVIDDIFYVPGYDIHGLVVAQGNPLLG
VHIYLYSDDVLEVNCPQGFGDPPGESKALCHAISDADGVFKFKSIPCGLYKLIPYYKGEN
TVFDVSPPFLFVSVQHEHATVPQKFQVTGFSVGGRVVDGNNKGVDGVKIIVDGQEKSITD
KEGFYKLDQVTSKRYTIEAKKEHYKFDKLHDFMVLPNMALVDDIKAISYDVCGLVETVSP
GYKAKVALTHGPENVKPQVKQTDNNGNFCFEVLPGEYRLSSFAAKPESSPELLLLPPYVD
VNVNRPLLNVRFHQAQVNVIGSVMCLENCGSSVYVTLVRLGGSSKKERKTVSLTDQSSEF
LFPNILPGKYRLEVKRQFPGLSEDNWCWDQNFFDVDVGTEDVNGISFVQKGYWVNVVSTH
AVDAYFTQPDGSHVNLKIEKGSQKICVGTPGVHELHFVNSCIFFGSSPVKIDTSNPSPVS
LKGEKYLLKGQISIESSSLDGLDTSADTILVDILNSEGLFVEGTSARFVGARNGQSDASI
FEYSLWANPGEKLTFVPRDARDNGERKILFYPRQHKVAVSQDGCQAAIPLFLGRLGLYIE
GSVSPPLSDVYIRIIAGANKENAPMKPAEVVLETTTGGDGVFVGGPLYDDITYNVEASKP
GYHVKAVGPYSFSCQKLSQISVHIYSEENPNELFPSVLLSLSGEDGYRNNSVAGAGGTFL
FDNLFPGSFYLRPLLKEYAFSPAAQAIELGSGESQKVVFQATRVAYSVMGSVTLLSGQPK
EGVLVEARSESKGYYEETLTDSSGSYRLRGLLPNTVYVIKVGKKGDLDNQIERASPDSVV
AEIGVGDIKDLNFLVFEQPHMTIISGHIEGNRIKELREHLRVEIRSANDPSKVESTLPLP
LSNFFQVKDLPKGKYLLQLRSVLPPNIHRFKTEVIEVDLEKHTQIHVGPLNYTLVEEHHK
QELTPAPVYPLIVGVSLIGLLLGMPRLKDLYQGTIGASLSGSMASAKKEMRRPTIRKKTY
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgacgattctgcatcatctgctcctcatcgcttgcatattcatctctctcaatccaatc
attcctgcgattgctgattctattctaggttgcggcggattcgtcgaggcgagttcggct
ttgattaagtcacggaaggcaactgatgcgaaattggattactcacatatcacggttgag
cttcggactgttgatggattgatgaaggatagaacacagtgtgctccaaatggctactac
ttcattccggtttacgacaagggctcctttgtgattaaaataaagggacctcaagggtgg
tcatgggatcctattcaagtccctgttgttgttgaccacaatggttgcaacgccaatgaa
gatataaattttcaattcacagggttcactgtatcaggtagagttgttggagctgttggt
ggagagagctgctcgcacaaaactggtggtccatcaagtgtaacagttgagcttttgcat
catccctcgggtgctgttgcttcatctgttttgacatccactgatggaagttactccttt
tcaaatattattccagggaattacaatgtacgtgctgcacataatgatttgcccattgaa
gtcaaaggttccacagaggtggaactgggctttggaaacgctgtaattgatgacattttt
tatgtccctggctatgatattcatggactggttgttgcgcagggaaatcctttattgggt
gttcatatatatttatattcagatgatgtcttggaggtaaattgtcctcagggttttggt
gatcctccaggcgagagcaaagctctctgtcatgctatatctgatgctgatggagtgttt
aaattcaaatctatcccctgcgggttatacaagctgattccatactacaagggagagaat
acagtgtttgatgtttcacctccattcttgtttgtgtcagttcagcatgagcatgcaacc
gtccctcaaaaatttcaggttactggattttctgttggtggtcgtgtagtcgatggaaat
aacaagggagtggatggtgtaaagattatagtagatggccaagaaaagtctattaccgat
aaagaaggattttacaagcttgaccaggtgacatctaaacgttatacaatagaagcaaag
aaagagcattacaagtttgacaaactgcatgatttcatggttttgccaaacatggctttg
gttgatgatattaaagcaatctcctatgatgtctgtggcctagtagagacggtctctcct
gggtataaagcgaaggttgctttaactcatggaccagagaatgttaagcctcaagtaaaa
caaactgataataatggcaatttttgctttgaggttctgccgggtgagtaccgcttgtca
tcttttgcagccaagcctgagagttctccagagctcttgctcttgcctccttatgttgat
gtcaatgtcaacaggcctttactaaatgtcagattccatcaggcacaagtaaatgttatt
ggttcagtcatgtgcctggaaaattgtggctcttctgtttatgttacccttgtaagattg
ggtgggagcagtaaaaaagagagaaagacagttagtttgactgatcagagtagtgaattt
ctgtttcctaacatcctaccagggaaatacagacttgaggtcaagcgccagtttccagga
ttgtcagaagataactggtgctgggatcaaaatttttttgatgtggatgttgggacagag
gatgttaatgggatttcatttgttcaaaagggttactgggtcaatgttgtctccactcat
gcggtagatgcgtacttcactcagccagatggctctcacgtgaacttgaaaattgagaag
ggttcacaaaaaatttgtgtaggaactcctggagtacatgaacttcactttgtaaactcg
tgtattttctttggtagctcacccgtgaaaattgatacatctaatccttcgcctgtgagt
ctaaaaggagaaaaatatcttctgaaaggtcaaatatctattgaatcaagctccctcgat
ggtttagacacgagcgctgacacaattttagtagacattctaaacagtgagggtttattt
gttgagggtactagtgccagatttgtaggtgctaggaatggtcaatccgacgcgtctatc
ttcgaatattcattatgggctaatcctggcgagaagcttacatttgttcctcgggatgca
agagataatggtgaaaggaaaatcttattttatcctagacaacataaagtcgcagtatca
caagatggttgccaagctgccattcccttatttttgggtcgtctggggttgtacattgaa
ggatcagtctctcctcccctttctgatgtatacatcagaattattgctggagcaaataaa
gaaaatgctccaatgaagccagctgaagtagtacttgaaaccaccacaggaggagatggt
gtttttgttggtggacccctatatgatgacattacttacaatgttgaagcttcgaagcct
ggctatcatgtaaaggcagtcggaccttattcattttcctgtcagaagctcagtcagatt
tcggtacatatatattcagaagaaaatcccaatgaactttttccttccgttctattatca
ttaagtggtgaagatggttatagaaacaattcagtggctggtgctggtggtactttcctc
tttgataacttatttcccgggagcttttatctcagacctttgcttaaggagtatgctttc
tcgcctgcagcacaggcaattgaacttggttctggggagtctcagaaagtagttttccag
gctactcgtgttgcttacagtgtgatgggttctgttactctgttatctgggcagcccaaa
gaaggtgttttagttgaagcccggtcagaatcaaaaggctattatgaggagaccctgaca
gattcatcaggaagttatcgccttagaggtctcctacccaatacagtctatgtaattaaa
gttgggaaaaagggtgaccttgataatcaaattgaacgcgcatctcctgattctgttgtt
gcggagattggagtaggggatatcaaggatttgaattttttggtgttcgaacaaccacac
atgacaatcatcagtggtcacatagaaggaaatagaattaaagagttacgggagcatctc
agggtggaaatcagatcagcaaatgacccatccaaggttgaatccaccttaccattacct
ttatccaacttcttccaggtaaaagatttgccaaaaggcaagtatcttttacagcttcga
tctgtactccctccaaacatccacagatttaaaacagaagttattgaggtcgacttagag
aaacatacccagattcatgtgggccccctgaattatactctggtagaggagcaccacaaa
caggaattgactccagctcctgtatatccactaattgtaggagtctcgttgattggtctt
cttctcggcatgccaagattaaaggatctatatcaaggcacaataggagcatcattatca
ggatccatggcaagtgccaagaaagaaatgagaaggccaactattaggaagaagacatat
tga
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