Daucus carota (carrot): 108222971
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Entry
108222971 CDS
T05350
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108222971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108222971
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108222971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
RIFIN
DUF668
Cauli_AT
Fusion_gly
Pox_EPC_I2-L1
SNARE
Motif
Other DBs
NCBI-GeneID:
108222971
NCBI-ProteinID:
XP_017252464
UniProt:
A0A161ZYB8
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All DBs
Position
5:complement(4762015..4765421)
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AA seq
220 aa
AA seq
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MSQVFEGYERQYCEISSSLSRKCTSAAVLQGEQKKQKVSEIKAGLDDAESLIHKMDLEAR
SLPPSVKAMLLAKLREYKNDLNNLKSGVKQITSANATQARDQLFESGLTDANMHSTDQRG
RLLMSTEKLNHSSSRIQESRRAMLETEELGVSILHDLHQQRQSLLHANNTLHGVDDNIGR
SKKLLTSMSRRMSRNKWIIGSIIVVLVLAIILILYFKLSR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggtgtttgagggatatgagaggcaatactgtgaaatttcttcgagtttatcg
cgaaagtgtacctctgctgcggtcctccagggagagcagaaaaagcagaaagtttctgag
ataaaagctggattggatgatgctgagtctttgattcataagatggaccttgaagctagg
agtttgccaccaagtgtaaaggctatgcttcttgccaagttacgtgaatataagaatgat
ctcaataatcttaaaagtggagtcaaacagatcacatcagccaatgccactcaggcacga
gatcaactcttcgaatcaggattgacagatgcaaacatgcattctactgatcaaagagga
aggttactaatgtcaaccgagaaattgaaccattccagcagcagaatccaggaaagcaga
agagcgatgctggaaactgaggaacttggtgtttctatccttcatgatttgcaccaacaa
cgccagtctctcctccatgccaacaacacgcttcatggggtggatgacaacattggcagg
agcaagaagctactgacctcaatgtcaagaaggatgagcagaaataaatggatcatcggt
tccatcattgttgtgcttgtacttgcaatcatattgatcctttatttcaagctgtcccgt
tag
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