Daucus carota (carrot): 108223020
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Entry
108223020 CDS
T05350
Name
(RefSeq) carbamoyl phosphate synthase arginine-specific large chain, chloroplastic
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00220
Arginine biosynthesis
dcr00240
Pyrimidine metabolism
dcr00250
Alanine, aspartate and glutamate metabolism
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
108223020
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108223020
00220 Arginine biosynthesis
108223020
Enzymes [BR:
dcr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
108223020
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATP-grasp_3
ATP-grasp_2
ATPgrasp_Ter
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-GeneID:
108223020
NCBI-ProteinID:
XP_017252539
UniProt:
A0AAF0X0I4
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Position
5:complement(4275176..4280149)
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AA seq
1190 aa
AA seq
DB search
MHQFVCQNASSRIDPFASFISPLSRNLLKPNSFLCSRNGSRRNSCYPGFSRRFSVVGCVG
SQSRINSVSVRNDEVESGIVFDKAVGKRTDIKKIMILGAGPIVIGQACEFDYSGTQACKA
LREEGYEVILINSNPATIMTDPETANRTYIEPMTPELVEQVLEKERPDALLPTMGGQTAL
NLAVALAESGALEKYGVELIGAKLDAIKKAEDRDLFKQAMKNIGLKTPPSGIGTTLEECI
EIASTIGDFPLIIRPAFTLGGSGGGIAYNKEEFEAICKSGLSASVTSQVLVEKSLLGWKE
YELEVMRDLADNVVIICSIENIDAMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREI
GVECGGSNVQFAVNPVDGEVMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLDQI
PNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPVLTTQMKSVGESMAVGRTFQESFQ
KAVRSLECGYSGWGCAQIKELNWDWDQLKYNLRVPNPERIHAIYAAMKKGLKVDDIHELT
YIDKWFLTQLKELVDVEQYLLAQSLSQLTKDELYEVKKRGFSDRQIAFATKSSEQEVRSK
RLSLGVKPTYKRVDTCAAEFEADTPYMYSSYDYECESAPTKKKKVLILGGGPNRIGQGIE
FDYCCCHASFSLQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERPDG
IIVQFGGQTPLKLALPIQRYLDECKPECASGGYVRIWGTSPDSIDAAEDRERFNAMLDEL
DIKQPKGGIAKSEADAIAIASDIGYPVVVRPSYVLGGRGMEIVYSDEKLVIYLANAVEVD
PENPVLIDKYLIDAIEIDVDALADAQGNVVIGGVMEHIEQAGIHSGDSACVLPTKTISPS
CLETIRSWTKKLAKKLNVCGLMNCQYAITSSGEVFLLEANPRASRTVPFVSKAIGHPLAK
YASLVMSGKSLHDIGFTAEVIPRHISVKEAVLPFEKFQGCDVFLGPEMRSTGEVMGISYE
FSIAFAKAQLAAGQKLPLSGTVFLSLNDLTKPHLPVIARAFLDIGYRIVSTSGTADVLEL
DGIPVERVLKLHEGRPHAGDMVANGNIQLMVVTSSGDKLDQIDGLQLRRMALAYKIPVIT
TVAGALATAEAIKSLKFSKIKMIALQDYFNIGTEDRKGKELQSISSSVSA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaatttgtttgtcaaaatgcctcttccaggattgacccttttgcttcttttatc
agccctttaagtcgtaatttgttgaaacccaattcgtttttgtgttcgagaaacgggtcg
aggaggaactcttgttatcctggttttagtaggcggttttcggttgttggctgtgttggg
tctcagagcaggattaattctgtttcggtgaggaatgatgaggtggagagtgggattgtg
tttgataaggcggtgggaaagaggacggatattaagaagattatgattcttggagctggt
cctattgtcattggacaagcgtgtgagtttgattactctgggactcaggcgtgtaaggca
cttagggaggagggatatgaagttattcttattaattcgaatcctgctactattatgacg
gaccctgaaactgcaaatagaacgtatattgagccaatgacgccggaactagttgagcaa
gtgttggagaaggagaggccggatgctctgttgcctaccatgggtggacagactgcactt
aatcttgcagtcgcgttggcggaaagtggggcgcttgagaagtatggagtggagttgatt
ggtgcaaagcttgatgctattaagaaggctgaagatagagacttgttcaagcaggctatg
aaaaatattgggctcaagactcctccttctggaattgggacaactcttgaggagtgtatt
gaaattgcaagtacaatcggagattttcctttgattatacggcctgcttttacactgggc
ggaagtggaggtggaattgcctataacaaggaggagtttgaggcaatttgtaagtcgggc
ctttcagccagtgtaacatcacaggttttggttgagaagtccctattgggatggaaagag
tatgagctagaggtcatgagagacttggcagacaatgtggttataatatgctcaattgag
aacattgatgcaatgggggttcacactggggactcaatcactgtggctcctgcgcagacc
ttgacagataaggagtatcagcgccttagagattactcaatagcaatcataagggaaatt
ggtgttgagtgcggtggttccaatgttcagtttgctgtcaatccagtcgatggggaagtt
atggttattgaaatgaaccctagagtttcaaggtcttcggctctagcctcaaaagctact
ggcttcccaatagcaaaaatggctgcaaagttgtcggttggttactcacttgatcagatt
cctaatgacatcacaaagaaaacacctgccagctttgagccatcaatagattatgtggtg
accaagattcccaggtttgcatttgagaagttcccgggttcacagcctgtactgacaact
cagatgaagtctgttggtgaatctatggctgtcggtcgcactttccaggagtcttttcag
aaagcagttcggtcattggaatgcggctactctggatggggttgcgcacagatcaaggaa
ttgaactgggactgggaccagttgaagtacaatctccgggttccaaaccctgaacgaatt
catgccatatatgctgcaatgaaaaaggggttgaaggttgatgacattcatgagttgact
tacatagacaaatggtttctcactcagctcaaggagttggtggatgtggaacaatacctc
ttggctcaatctttgtctcagttaaccaaggatgagttatatgaagtgaaaaagagaggt
ttcagtgataggcagatagcttttgcaacaaaatcctcggaacaagaagtgcgctcaaaa
cggttgtccttaggtgtgaagccaacatataagcgagttgatacctgtgcagcagaattt
gaggctgacactccttacatgtactcatcttacgactatgaatgtgaatcggctcctacc
aagaagaaaaaggtattgatattaggtggaggacctaaccgaattggccaaggaattgag
tttgactattgctgctgccatgcatccttctcccttcagtctgcaggctatgaaacaatt
atgatgaattcaaatcctgaaacggtctctacagattacgataccagcgatcgactttat
tttgaacctcttacagttgaagacgttcttaatgtaattgacttggaacgtccagatggc
atcattgtgcagtttggaggtcagacccctctaaagcttgctcttcccattcagcggtac
ttagatgagtgcaagcctgaatgtgctagtggtggttatgttcgaatttggggtacatct
cctgattctattgatgctgcggaggatagggagaggttcaatgctatgcttgatgaacta
gatattaagcaaccaaaaggtggcattgccaaaagtgaagctgatgctattgccattgca
tcggacataggataccctgttgttgttaggccttcttatgttttgggtggccgaggaatg
gagattgtttatagcgatgagaagttggtaatctatcttgcaaatgctgttgaagtagac
cctgaaaatcctgtcctcattgacaaatatttaattgatgccattgagattgatgttgat
gcacttgcagatgcccaaggtaatgtggtgataggcggggtaatggagcacattgaacag
gctgggattcattcaggtgattcggcttgtgtgttgccaacaaaaactatttcgccttcg
tgcttagaaaccattaggtcttggactaagaaattggcaaagaagctaaatgtatgcgga
ctcatgaattgtcaatatgcaattacatcatccggagaggtgtttttgcttgaggcgaat
ccccgtgcatcccgtacggtcccttttgtatccaaggctattgggcatccattggctaaa
tatgcttctcttgtcatgtcaggaaagtctcttcatgacatcggttttactgcggaggtt
ataccaaggcatatatcagttaaggaagctgttcttccatttgagaagttccagggttgt
gatgtctttctaggtcctgagatgcgtagcactggtgaggtaatgggcatctcctatgag
ttttcaattgcatttgccaaagctcagctagctgcagggcagaagctaccactttcaggg
acagtgttccttagcttgaatgacttgacaaagccccatcttcccgtgatcgctcgtgct
tttcttgatattggatacagaatcgtttctacttctggaacagcagatgttctcgaacta
gatggcattccagtggagcgagtgttgaaactgcatgaaggtcggccacatgctggtgac
atggttgctaatggtaacattcagttaatggtagtcacaagttccggtgacaagcttgat
caaattgatgggctacaattgagaaggatggctcttgcttacaagattcctgtaataaca
actgttgctggagctttggccactgccgaggcaatcaaaagtttgaaatttagcaagatt
aagatgattgctttgcaggactacttcaatattgggactgaagacaggaagggaaaagag
ttacaatccatctcttcctctgtttcagcttaa
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