Daucus carota (carrot): 108223050
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Entry
108223050 CDS
T05350
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108223050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223050
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
108223050
Membrane trafficking [BR:
dcr04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
108223050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
108223050
NCBI-ProteinID:
XP_017252592
LinkDB
All DBs
Position
5:2401815..2412201
Genome browser
AA seq
1018 aa
AA seq
DB search
MELDQIVCLVVLCLSLSLVLFKVDSKYMVYDTKAGIVEGKINVHLVPHTHDDVGWLKTVD
QYYVGSNNSIQGACVQNVLDSLIPALLADENRRFIYVEQAFFQRWWRDQSEATQNTVKRL
VESGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRFVKQVFNVTPRIGWQIDPFGHSAVQ
AYLLGAEVGFDSLFFGRIDYQDRTKRKAEKSLEVVWQGSKSLRSSAQIFAGAFPENYEPP
SGFYFEVNDDSPVVQDDMSLFDYNVQERVNDFVAAALAQANITRTDHIMWTMGTDFKYQY
AQTWFRNMDKLIHYVNQDGRVNALYSTPSFYTDAKYAVNALWPLKTDDFFPYADRINAYW
TGYFTSRPALKGYVRLLSGYYLAARQLEHFRGRSKAGPNTDSLADALAIAQHHDAVSGTS
QQHVANDYAKRLSIGYKEAEDVVATALACMVESASKSECESPTTKFQQCPLLNISYCPPT
EVDLSSGKKLVIVVYNSLGWKKTDVVKIPVMDKRVAVFDSNGNSVESQLVPIASVSIGIR
NFYTKAHVGKSPNATPKYWLAFTASVPPLGFRTYVVSTPKGADAAASLVMRKSYKSFQND
DYTIEVGTGHLKLLYSVNEGKLTHYVNDESKIKASVQQSFMYYNGVTEDSQADGAYVFRP
NSSFPLGSKGQTPIQVFRGPLYDEVRQSINPWIHQITRVYKDKEHAEVEFKVGPIPIDDG
VGKDVVTKITTSTKSNKIFYTDSNGRDFLQRIRDFREDWKLEVNQPVAGNYYPINLGMYL
KDDSSEVSVLVDRSVGGSSIIDGQMELMLHRRLLHDDGRGVAEALNETVCISGKCAGLTI
QGKYYLRIDPLGEGAKWRRSYGQEIYSPFLLAFTEQDGDKSTKFQVSSFSYMDSSYSLPD
NVALLTLQELEDGTVLLRLAHLYEIGEDKLLSKLASVELKKIFSKRKIHKIDEMSLSANQ
GREEMERKRLVWKVEGSHDEPKVLRGGPVDPQKLVVELAPMEIRTFVIKFGSQGSTAS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgatcaaattgtgtgtttagttgtgttatgtttgagtttgagtttggttttg
tttaaggttgattcgaagtatatggtttatgatactaaggcagggattgtggaggggaag
atcaatgtgcatcttgtgcctcacactcatgatgatgtgggatggttgaaaactgttgat
cagtactatgttggctccaataattctatccagggagcttgtgtgcagaatgtacttgat
tcgttgattccggctttgcttgctgatgagaatcggaggtttatttatgtcgaacaggcg
tttttccagcggtggtggagggatcagagtgaggcgacacagaatacggtcaagcgtctc
gtggagtctggtcagcttgagttaattaatggaggtatgtgcatgcatgatgaggcagct
ccacattacatagatatgatagatcagacaacgttgggccaccgatttgttaagcaggtg
ttcaatgtaactccaagaattgggtggcaaattgacccctttggacattctgcagtgcag
gcctatctgctaggagcagaggttggatttgattctcttttctttgggcgaattgactac
caagacagaactaagcggaaagccgagaagagccttgaggtcgtctggcagggatcgaag
agtttgcgctcttctgcacaaatctttgctggtgcatttcctgaaaattatgaaccccca
agtggtttttactttgaagttaatgatgattctcccgtagtccaggatgacatgagtttg
tttgactacaacgtgcaagagcgtgttaatgattttgtagctgctgcgttggcacaggct
aacattactcggaccgatcacatcatgtggaccatggggacagacttcaagtatcagtat
gctcagacatggttccggaatatggacaagcttattcattatgtcaatcaagatggccgt
gtcaatgctctatattcaacaccatccttctacactgatgcaaaatatgctgtaaacgca
ttgtggccactcaagacagatgacttcttcccatatgcagatcgtataaatgcatactgg
accggatattttactagtaggcctgctttgaagggctatgttaggttgttgagtgggtat
tatttggcagcaaggcagttggaacattttagaggaagaagtaaagcaggccctaatact
gacagtttggctgatgctttggcaattgcgcaacatcatgatgcagttagtggtacttca
cagcagcatgtggctaatgattatgcaaagaggctatcaataggatacaaagaggctgaa
gatgtcgttgcaactgcactagcttgtatggttgaatcagcatcaaaatctgaatgtgaa
agtccaacaaccaagtttcaacagtgtccgcttttgaacattagttattgtccaccaact
gaagttgatttatcatccgggaagaaattggtcatcgttgtttacaattccctggggtgg
aaaaaaacggatgttgtgaaaattccagttatggacaagagggttgcagtttttgattct
aatggcaatagtgttgaatcacaacttgtccctattgctagtgtatccattggaatcagg
aacttttatactaaagcgcatgtgggtaaatctccaaatgctacccctaaatattggctt
gcatttacagcatctgttccacctcttggattcagaacttatgttgtttcaactcctaaa
ggagcagatgcagctgcttctttagtgatgcgaaaatcttacaaatcttttcagaatgat
gattacaccattgaagttggaacgggacatttaaagcttctgtattctgtaaatgaaggc
aagcttactcactatgtcaatgatgaaagcaagatcaaagcctctgtacagcaatcattc
atgtattataatggagttacggaggattcacaggctgatggagcatatgttttccgtcca
aatagttcatttccccttggttctaaaggacagactcctatacaagtttttcgcggacct
ctgtatgatgaagttcgtcaaagcatcaacccatggatacatcagattacaagggtgtac
aaggataaggagcatgctgaggttgaatttaaagttggcccaatacccattgatgatgga
gtcgggaaagatgttgtaactaagattacaacctccacgaaaagcaataaaatattttac
acagattcaaatggacgtgatttccttcaaagaattcgagattttagagaggactggaaa
ctagaagtgaaccaacctgttgcaggaaattattatcctattaatctcggtatgtacttg
aaggatgatagcagcgaagtttcagttttggtcgataggtcggtggggggatccagcatt
atcgatgggcaaatggagctgatgctccacaggagattacttcatgatgatggtagaggt
gttgcagaggcactaaatgagacagtttgcatttctggcaagtgtgctggtttaactata
caagggaagtattatcttagaattgatcctctaggagagggagctaagtggcgtaggtct
tatgggcaggagatatattctccatttctattagctttcactgaacaggatggagataaa
tcgactaaatttcaagtgtcatccttttcgtatatggattcttcatacagtctcccagat
aatgttgcattgctaaccctccaggagcttgaagatggtaccgttcttcttcggttggca
cacttatatgagattggagaagacaagcttctatctaagctggcaagcgtagaactgaaa
aagatattttcaaaaagaaagatacacaaaattgatgagatgagcttatctgcaaaccaa
ggaagagaagaaatggaaagaaaaagattagtttggaaggtagaaggctctcacgacgaa
ccaaaagtattgagagggggtccagttgatcctcaaaagctggtggtggaactcgctcca
atggaaatacggacctttgttatcaaattcggctctcaagggtctacagcttcatga
DBGET
integrated database retrieval system
