Daucus carota (carrot): 108223090
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Entry
108223090 CDS
T05350
Name
(RefSeq) calnexin homolog 1 isoform X1
KO
K08054
calnexin
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
dcr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108223090
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108223090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108223090
04131 Membrane trafficking [BR:
dcr04131
]
108223090
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
dcr04091
]
108223090
Chaperones and folding catalysts [BR:
dcr03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108223090
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108223090
Autophagy
ER-phagy
Other ER-phagy associated proteins
108223090
Lectins [BR:
dcr04091
]
L-type lectins
108223090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF359
Motif
Other DBs
NCBI-GeneID:
108223090
NCBI-ProteinID:
XP_017252646
LinkDB
All DBs
Position
5:complement(2289070..2292992)
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AA seq
538 aa
AA seq
DB search
MEEARRRQMCLSYVLLLAISSLACVLASDADTIFYEPFDEEFSGRWIVSEKDEYQGAWKH
SKSEGHEDYGLLVSEPARKYAIVKELEEPVNLKDGTVVLQFETRLQNGLECGGAYLKYLR
PQEAGWVPKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHVKNPPSVPSD
KLTHVYTAILKPDNEIRILVDGEEKKKVNILSADDFEPALIPAKTIPDPDDKKPEDWDER
AKIPDPDATKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIEDPEASKPEDWDDEEDGEW
EAPKIDNPKCEEAPGCGEWKKPMKSNPAYKGKWHAPLIDNPSYKGIWKPQQIPNPIYFEL
DRPDYEPIAAIGIEIWTMQDGILFDNILIASDEKVAESYRQTKWKPKFDVEKEKQKAEEE
ASSASDGLKGIQKKVFELLYKIADIPFLQNHKFKILDAIEKAEKQPNLTIGVLVSIVVVF
FSVLLKLLFGGKKPQTKVTAEVKKTDAAEPSSIQESDEKKDDSDDTAAPRRRTVRRDD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctagaaggcgccagatgtgtcttagctatgtcttgttgctcgcgatttct
tcgctcgcttgtgttctagcttctgatgccgatacgattttctatgagccgttcgatgag
gagtttagtggacggtggatcgtttctgagaaggatgaatatcaaggtgcatggaagcac
tcaaaaagtgaaggacatgaggattatgggcttctcgtgagtgagccggccaggaagtat
gcaattgtgaaggagcttgaggaacctgtaaatctcaaggacggaactgttgttctccaa
tttgagacacgtcttcaaaatggccttgagtgtggtggtgcgtatctcaaatatctccga
ccccaggaagctgggtgggtgccgaagggatttgacaatgaatctccatactcaataatg
tttggacctgataaatgtggggctacaaacaaagtccactttattctaaaacataaaaac
ccaaagagtggagagtatgttgagcatcatgtcaagaacccaccatcagtgccatcagac
aaattgacccatgtgtacactgccattttgaagcctgataacgagataaggatcttggtt
gatggagaagaaaagaaaaaggtcaacattctatcagctgatgactttgagccagcacta
attccagccaagactatccctgatccagatgataagaagcctgaggattgggatgagaga
gctaagattccagatccagatgccacaaaaccagatgattgggacgaggatgcacctatg
gaaattgaagatgaggaagctacaaaacctgaaggatggttggatgatgagcctgaggaa
attgaagatcccgaggcatccaaacctgaagattgggatgatgaggaggatggtgaatgg
gaggctccaaagattgataaccctaagtgtgaggaggctcctggctgtggtgagtggaag
aagccaatgaagagtaacccagcatacaaaggtaaatggcatgctccacttatcgacaac
cccagctacaagggtatatggaagcctcagcaaattccaaaccccatctactttgaactt
gacagaccagattatgagccaattgctgcaattggcattgagatttggacaatgcaagat
ggcatattgttcgacaacattttgatagcaagtgatgagaaggttgctgaatcatacagg
cagacaaaatggaagccaaagtttgatgtggagaaagagaaacagaaggctgaggaagaa
gcaagcagtgcgtcagatggtctcaagggcatccagaagaaggtgtttgaactactctac
aagattgcggacattcctttcctgcagaaccacaaattcaaaattttggatgctattgag
aaggctgagaagcaaccaaaccttacaattggcgtacttgtctctatagtggtggttttc
ttctcagttctgctaaaacttctctttggtggaaagaagcctcagacaaaggtcactgct
gaagtaaagaagactgatgcagctgagccttcaagcattcaggaaagtgacgagaagaag
gatgacagtgatgatacagcagcacctcggaggaggactgttcggcgtgatgactaa
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