Daucus carota (carrot): 108223150
Help
Entry
108223150 CDS
T05350
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108223150
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108223150
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108223150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
HEAT_GCN1
Beta-prop_Nup120_160
WD40_like
TPR_GEMI5
Clathrin
WD40_RFWD3
Beta-prop_WDR35_TULP_N
TPR_1
Beta-prop_DCAF12
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
108223150
NCBI-ProteinID:
XP_017252750
UniProt:
A0A164XC34
LinkDB
All DBs
Position
5:1404661..1418364
Genome browser
AA seq
908 aa
AA seq
DB search
MPLGLEIKRKVANRSDRVKSVDLHPTEPWVLTSLYTGTVCIWNYQSQTMAKSFEVTDLPV
RSAKFIPRKQWVVAGADDMHIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYILSSADD
MLIKLWDWENGWNCTQIFEGHSHYVMQVTINPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENALNYGLERVWAIGYMKGSRRVLIGYDEGTIMVKIG
RDEPVASMDNSGKVIWAKHNEIQTVNIKSVGAEYEGTDGERLHLAVKELGTCDLYPQSLK
HNPNGRYVVVCGDGEYIMYTALAWRNRSFGSALEIVWSTDGEYAARESTSRIKIFNKNFQ
EKKSIRPTFSAERIYGGPLLAMFSNDFICFYDWAECRLIRRIDVNVKNLYWAASGDLVAI
SSDASFYILKYNRDVVSAHLESGKSADERGVEDAFELLYEINERVRTGIWVGDCFMYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVIGYTLLLSLIKYKTLVM
RDELKRASELLSSIPKEQLNSVARFLESRGMVEDALEVATDSDYRFELAIQLGKLQIAQE
IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDLSGLLLLYSSLGDAEEILKLALLA
KEQGRNNVAFLCLFMLGKVEECLELLIESNRIPEAALMARSYLPSKVSEIVALWRKDLNK
VNLKAAESLADPEEYPNLFEDWQVALGVESKVADTRSNYPPAAEYMNLANRSNASLVEAF
RNMQMDHEETLENGGSDYELAEQNGKIQNKQEGQDEAVVVDPDSTDGVVLVNGNEADEDL
GTTGKPSA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcggacttgaaattaagaggaaagttgctaataggtcagacagggtcaagtct
gtcgatctccacccgaccgagccatgggtcctgacaagtctatacacgggtactgtttgt
atatggaactaccaatcacagacaatggcaaaatctttcgaagtgacagatttaccagtt
aggtcagctaaattcataccacgcaagcaatgggttgtagctggagcagatgatatgcat
attcgtgtatacaattacaataccatggataaagttaaagtctttgaggcgcacacagat
tatatccggtgtgtggctgttcatcctactcttccatacatactttcttcagcagatgac
atgcttataaagctgtgggactgggagaatgggtggaactgtactcaaatttttgaaggt
cattcccattatgtcatgcaagtgacaattaatccgaaagacaccaatacctttgccagt
gcatccctagatcgtaccataaagatatggaatcttggctcgcctgacccaaatttcacg
ttggatgcccatctgaaaggtgtcaattgcgtagattatttcactggtggtgataaacct
tatctcataactgggtctgatgatcatactgccaaggtatgggattaccagacaaaaagt
tgtgtccagactcttgaaggacacacacacaatatctcagcagtatgttttcatcctgaa
cttcccattataataaccggttctgaggatggcactgtccgtatatggcattcaacaact
tacaggctcgagaacgcactgaactatggccttgaaagagtttgggctattggatacatg
aaaggttctagaagggtgttaattgggtatgatgaaggaaccattatggttaaaattggt
cgagatgaacctgttgctagtatggacaacagtggaaaagttatatgggctaagcataat
gagattcaaactgttaatattaaaagtgtgggagcagagtatgagggtactgatggagaa
agattgcacttggcagttaaagagttgggtacctgtgatctttacccacaaagcttgaag
cataaccccaatggaagatatgttgtggtctgcggagatggtgaatatatcatgtataca
gcattagcctggcgaaatagatcatttggttctgccctggagattgtttggtctactgat
ggagaatatgctgctagggaaagtacgtctagaattaaaatcttcaataaaaacttccag
gaaaagaagagcatccgtccaacattttctgctgagcgtatatatggggggcccttactg
gcaatgttctcaaatgattttatatgcttttatgattgggctgagtgcaggttgattcga
cgtattgatgtaaatgtcaaaaatctctactgggcggctagtggggacctagtggctatt
tccagtgatgcatcattttacattttaaagtacaaccgtgatgtagtttctgcgcattta
gagagtggaaaatctgcagatgaacgaggggtagaagatgcatttgagcttctctatgag
ataaatgaacgagtcagaactggaatttgggttggggattgtttcatgtacaataattcc
tcatggaggctaaactactgtgttggtggtgaggtaaccacgatgtttcatctggatcga
cctatgtacctattaggctatcttgccagtcaaagtagagtgtatcttattgataaagag
ttcaatgtgattggttacaccttgcttcttagcttgattaagtataagacacttgtgatg
cgtgatgaactgaaacgagcaagtgaacttctatcttctatcccaaaagagcaacttaat
agcgtggctcggttcctggaatcgcgtgggatggtagaagatgctctagaagttgccaca
gactccgattacagatttgagctagctattcagctcggtaagctacaaattgctcaggaa
attgctggtgtagcacagagcgagtccaagtggaaacagttgggtgcattagctatgtcc
actggaatgttggagatggctgaggaatgtttaaagcatgcaaaagacttaagtggattg
ttactactgtattcttctttaggagatgctgaggaaatcttaaaacttgcattgcttgct
aaagagcaagggagaaacaatgtcgcttttctttgtctgtttatgttaggtaaagttgaa
gagtgcctggagctgttaattgagagcaaccgaatacctgaggctgctttaatggcaaga
tcttatttacctagcaaggtttcagaaatagttgcactttggagaaaagatctcaataag
gttaacctgaaagctgcggaatctttggctgatcctgaagagtacccgaacctctttgag
gactggcaagttgcacttggtgttgaatcaaaagttgcagatacaaggagtaattatcct
ccagcagcagagtatatgaaccttgccaaccgatccaatgccagtctcgtggaagctttt
agaaacatgcaaatggaccatgaggaaacacttgaaaatggaggctcggattatgagctg
gcagaacagaacggaaaaatacaaaataagcaagagggtcaagatgaagctgttgtggtg
gatcctgactctacagatggcgtggtacttgtcaatggtaacgaagctgatgaagatttg
ggtacgactgggaaaccgtcagcctaa
DBGET
integrated database retrieval system
