Daucus carota (carrot): 108223165
Help
Entry
108223165 CDS
T05350
Name
(RefSeq) adagio protein 1-like
KO
K12115
clock-associated PAS protein ZTL
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108223165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108223165
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108223165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_6
Kelch_1
PAS_9
F-box-like
PAS
PAS_3
F-box
F-box_5
PAS_8
Motif
Other DBs
NCBI-GeneID:
108223165
NCBI-ProteinID:
XP_017252772
UniProt:
A0A164YMT8
LinkDB
All DBs
Position
5:complement(25385396..25389916)
Genome browser
AA seq
605 aa
AA seq
DB search
MERDSNSDDDVGFLLNDGGPFPFPLNSLLEPAPCGLVVTDALEPDNPIIYVNSVFEMVTG
YSAQDVLARNCRFLQCRGPYAKRRHPLVDASVVSEMKRCLEEGIEFQGELLNFRKDGSPI
MNRLRLIPIYGDDETITHIIGIQFFSEANVDLGPLRSSMKEAASAQDRFHFSLSSNSLVQ
DQSRNIQKGLCGILHLSDEVLSHNILSRLTPRDIASVSSVSRRLYEVTKTEDLWRMVCQN
EWGCETIRVMEAVPGDKRLGWGRLAKELTTLESAAWKKLTVGGTVEPSRCNFSACAVGNR
VFLFGGEGVNMQPMDDTFVLDLNCNNPEWQHVKVGSSPPGRWGHTLSCMNGSNLVVFGGC
GQQGLLNDVFVLDLDAKHPTWREISGLAPPLPRSWHSSCILDGSKLIVSGGCTDSGVLLS
DTFLLDLSTERPIWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVYT
MDLGEDEPCWTSVTGSEMPGAGNPGGLAPPPRLDHVAVSLPGGKILIFGGSVAGLHSTSL
VYILDLKEEKPTWRILDVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLGDLHELSF
AGSPV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagacagtaattctgatgatgacgtgggctttctgttgaacgatggtgggccc
ttcccctttccactcaatagcttgttggaaccagcaccttgtggccttgttgttaccgat
gctctggagccggataatccgattatatatgttaattccgtgtttgaaatggtcactggt
tattcagctcaagatgttctcgctcgtaattgtcgttttttgcaatgtagaggtccatat
gcgaaaagaaggcatcctctggtggacgcttcagttgtgtcagagatgaaaagatgtctt
gaagaagggattgagttccagggtgaattgctgaactttagaaaggatggatccccaatt
atgaatcgattacgtctgattcctatatatggagatgatgaaaccataacacatataatt
gggatccagttctttagcgaagcaaatgtagacctgggcccacttaggtcttcaatgaag
gaagctgctagtgcacaagatcgttttcattttagtctttcttctaattctctagttcaa
gatcaaagcagaaatattcaaaaaggcctttgtgggatactgcacttgagtgacgaagtc
ttgtctcataatattctttcacgtttgaccccaagagatattgcatctgttagttccgtc
agcaggcgactttatgaggtaacaaaaactgaagatctttggagaatggtctgtcaaaat
gaatggggctgtgaaacaattagggtgatggaggcagttcccggggataaaagactaggc
tggggtagactggcaaaggagctaaccactcttgaatctgcagcatggaagaaattaact
gttggaggaacggttgaaccatcgcgttgcaacttcagtgcatgtgcagttgggaaccgt
gtgtttctttttggtggagagggggtcaacatgcagccaatggatgatacgttcgtatta
gatttgaattgcaacaatcctgagtggcaacatgttaaagtgggatcttcacctcctggg
cgttggggtcacacactttcttgcatgaatggatctaatttagttgtttttggaggttgt
ggacaacagggattactcaatgatgtctttgttttggacttggatgccaagcatccaaca
tggcgtgagatctctggtttggctcctccccttccaaggtcttggcatagctcctgcatt
cttgatgggagcaaattgattgtttctggtggttgcacagattctggtgtacttcttagt
gacacttttctgctagacctttctactgagaggccaatttggagagagataccagcagca
tggaccccaccttctcgacttggtcacactctctctgtttatgggggcaggaaaatcttg
atgtttggtggtcttgccaagagtggccccctgcggtttcgttcaagtgatgtatataca
atggatttgggtgaagatgaaccttgttggacaagtgtgactgggagtgaaatgccgggt
gctggaaatccaggaggattagctcctccgccaaggctagatcatgtagctgttagcctc
cctggtggcaagattctgatctttggtggttccgtggcaggtcttcattcaacctcacta
gtttatatcctagatctgaaggaagagaaacctacatggaggatattagatgtacctggc
cgccctccaagatttgcgtggggacatagtacctgtgttgttggaggaacaagagcaata
gtccttggaggtcaaactggtgaggagtggatgctcggtgatcttcatgagttgtctttt
gcaggttctcctgtttga
DBGET
integrated database retrieval system