Daucus carota (carrot): 108223198
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Entry
108223198 CDS
T05350
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
dcr
Daucus carota (carrot)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
AAA_7
IstB_IS21
NACHT
AAA_18
NBD_SMAX1
PhoH
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
108223198
NCBI-ProteinID:
XP_017252815
UniProt:
A0AAF1AYF4
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Position
5:complement(2224590..2231857)
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AA seq
958 aa
AA seq
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MEVSSSSYSQPLCLHFPPPHHRRVSARFNPHKAQGPLFISPNYPFASSCSTSSSCSSLFG
NTLNYVSIGVYKPSPPLKKRSFEVVCGVFERFTERAIKAVMFSQKEAKGLGQKMVFTQHL
LLGLIAEDRSPLGFLGSGVTIEKAREVVREVWSDEIGDQKDNVKGGSGNKADSSSSATDV
PFSVSTKRVFEAAVEYSKNMGYHFIAPEHIAIGLFTVDDGNAGRVLKRLGVNANDLATVA
VSRLQGELAKDGRDPPTPSKRMREKSVPGKVTIDRSSEKAKDKSALAQFCVDLTARASDG
LIDPVISRETEIQRIIQILCRKTKCNPILLGEAGVGKTAIAEGLAINILEGNVPEFLLTK
RILSLDIGLLISGAKERGELEGRVTTLLKEIKESGKVVLFIDEVHSLIGSGTVGRGNKGS
GLDIGNLLKPSLGRGEIQCIASTTMDEYRMHFEKDTALARRFQPVLINEPSQEDAVKILL
GLREKYEVHHRCRYTLEAINAAVMLSARYIPDRHLPDKAIDLIDEAGSKSRMESYKRRKA
QEIHILTKSPDDYWQEIKEVHAMHEVVLEGKRNNLDEASSMEDDTKLNLEQSVAMSNDDE
SVVGPDEIAVVASLWSGIPVQQLNADERMLLVGLEEMLRKRVIGQDEAVAAISRAVKRSR
VGLKDPDRPIAAMLFCGPTGVGKTELTKALAQCYFGSEDAMLRLDMSEYMERHTVSKLIG
SPPGYVGYGEGGTLTEAIRRRPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVS
FKNALVVMTSNVGSAAIAKGRQNSIGGFFHADDDESASYAGLKSLVMEELKSYFRPELLN
RIDEVVVFRSLEKTQLLEILDIMLQEVKKRLLSLGINLEVSKATLDLICEQGYDRSYGAR
PLRRAVTLLVEDPLSEAILSEEYKPGDTAIVDLDDSGNPVVTNKSNQNLQITDTKSFL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttcatcttcttcatattcacaaccactttgtcttcactttccaccaccgcat
caccgccgcgtctcagccagattcaacccccacaaagcgcagggccctctttttatatcc
ccaaactacccttttgccagttcttgctcaacttctagttcttgctcatctttgtttggg
aacaccttgaattatgtgtctataggggtttataagcccagcccacctctcaaaaagaga
tctttcgaggttgtgtgtggggtttttgagaggtttactgagagagcaatcaaagctgtg
atgttctctcagaaagaagccaagggtttaggccaaaaaatggtgttcacgcagcatctg
ttgttggggttgattgcggaggatcggtctcctttggggtttttaggatctggtgttaca
attgagaaggctagagaagttgttagagaggtttggagtgatgaaattggtgatcagaag
gataatgtgaaagggggaagtggtaataaggctgattcatcgagctctgctacagatgtt
ccgttttctgttagcacgaagagggtgtttgaggctgcggtggagtattcgaagaatatg
gggtatcattttattgctccggagcatattgctataggattgtttacggttgatgatggt
aatgctggccgtgtactaaagagattaggggtaaacgcaaatgatttggcaacagtagcc
gtttctaggctgcaaggagagcttgcaaaagatggtagagacccacccactccatctaaa
cgaatgcgcgagaaatcagttcctggaaaggtcactattgacagatcatctgaaaaggct
aaagataaaagtgctttggcccaattctgtgttgatcttactgctcgtgctagtgacgga
ctcattgatccagtgattagtcgggaaactgaaattcagagaatcattcaaatcctttgc
agaaaaacaaaatgcaatcccattcttcttggtgaagctggggttggaaaaactgctatt
gctgaagggctggcaataaatattttggagggaaatgttcctgaatttctcttgacaaag
agaatattgtcattagatataggtctactaatctcaggagcaaaagagaggggagagcta
gagggacgtgtaactactttgctgaaggaaataaaagagtcaggcaaagttgttcttttc
atagatgaagtgcactcactaattggatcgggaacagttggtagaggtaacaaggggtct
ggtcttgacatcggcaatcttttgaaaccatcacttgggagaggtgaaatacagtgtatt
gcatctacaactatggatgaataccggatgcattttgagaaggatacagccttggcacga
cgattccagccagtgctgataaatgaaccaagccaggaggatgctgtgaaaattctcttg
ggcctgcgtgaaaagtatgaagtgcatcacagatgtagatatacattggaggcaattaat
gctgctgtgatgctttcggcaagatatattcctgataggcatcttcctgacaaagctatt
gatcttattgatgaggcgggaagcaaatcgcgtatggaatcctacaagagaagaaaagca
caagaaattcatatacttacaaagtcaccagatgattactggcaagagattaaagaagtt
catgccatgcacgaagtggttctggagggtaaaagaaacaacttggatgaagcatccagc
atggaagatgacaccaagcttaatctggagcagtctgtagctatgagcaatgatgatgag
tcagtagtcggacctgatgaaatcgctgtagtggcttcactttggtctgggattcctgtt
cagcagctcaatgctgatgaaagaatgctcttggttggtcttgaagagatgcttaggaaa
cgggtcattggtcaagatgaagctgttgctgctatttctcgagctgttaagagatcccgt
gtcggcctaaaagatcctgataggccaattgcagcaatgcttttctgtggtccaactggt
gttggcaaaacagaactgacaaaagctttggcacagtgctattttggttctgaggacgca
atgctaaggctcgacatgagtgagtatatggagaggcatacagttagcaagttgattggc
tcacccccaggatatgtaggctacggagagggaggcactcttacggaggccattagaagg
cgccctttcacagttgtgttgcttgatgaaattgaaaaagcacatccagatatattcaat
atacttctccaattgtttgaagatggtcaccttacagattcgcagggccgaagggtatct
tttaagaatgcattagtggtgatgacctctaatgtgggttctgcggccattgcgaaaggt
agacaaaattctataggaggtttctttcatgctgatgatgatgagtcagcttcatatgct
ggattgaaatcactggtgatggaagaacttaagtcctacttccgccctgagttactcaac
agaatagatgaagtagttgtattccgttcattggaaaagactcagctgctcgagatactg
gatattatgttgcaagaggtgaagaaaaggctcttatctcttggaattaatttagaggtg
tctaaagcaacattggacctaatatgtgaacaaggatatgaccggagttatggtgcacgg
ccacttaggagggccgttactcttttagttgaggatcccttgagtgaagcaattctttcg
gaagaatataagcctggcgatacagccattgttgatctggatgattcaggaaatcctgtt
gttactaacaaatccaatcaaaacttacagataactgatacaaaatcgttcttgtag
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