Daucus carota (carrot): 108223219 Help Entry 108223219         CDS       T05350                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism dcr  Daucus carota (carrot) Pathway dcr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dcr00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     108223219  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dcr03400]     108223219 DNA repair and recombination proteins [BR:dcr03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      108223219 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Tudor_KDM3B LBR_tudor Motif Other DBs NCBI-GeneID:  108223219 NCBI-ProteinID:  XP_017252846 LinkDB All DBs Position 5:complement(33745209..33754923) Genome browser AA seq 1273 aa AA seqDB search MSNSRRSSNGRSPLVNQQRQITSFFTKSPSSTPSPSSILPKSHSKLNPNPNPKITSKLSP ASTTTPSPSQSKRSKPVLVIGPTHSPITPRRLVDEDAVGKRVKVYWPLDKMWYEGCVKSF DMESGKHLVQYEDSEEELLDLSKEKVEWIEEGSVKKFRRLRKMSVVEDEEEEKVESGGDG DDSTDEDWGKNAEKEVVEDEEESMELDDEDEEGGSSVKKMPVKKFEFKKRKNGGVDEASS CKKSRSGVDVGRNKLINQINNESGKGSVLSDKCPTSDAAERFGMREMEKFKFLSENRRDA NKRRPGDVNYDPKTLYLPPQFLNSLTGGQKQWWEFKSMNMDKVLFFKMGKFYELFEMDAH VGAKELDLQYMKGAQPHCGFPEKNFSMYIEKLAQKGYRVLVVEQTETPAQLDLRRKEQGS KDKVVKREICAVVTKGTLTEGEMQLANPDASYIMAVAECCRSFSSEECRIYGVCVVDVAT SKILLGQFEDDTECSVLSCLLTELRPVEIIKPAKLLSLETERVLQRHTRNPLVNELVPLS QFWDAERTACEVKDIYKRINGSLSHATDSSGKERDLNYLPEVLSELVAAGDKGMHALSAL GGTIFYLKQAFLDETLLRYATYEVLPCSGGSDISRKPYMILDAAALENLEIFENSRNGGS SGTLYAQLNHCITAFGKRLLKTWLARPLYQIDLIKERQDAVAALKANLSSAIEFRKELSR LPDMERLLARIFAGSEACGRNANKVVLYEDASKKQLQEFISALRGCELMNHACFILGGTL ENINFGPLHHLLTPGKGLPNVQSILKHFKNAFDWVDANNSGRIIPREGADEEYDSACQAV QGIESNLNKHLKEQRKVLGDTSINYVTIGKDAYLLEVPESLSSSVPRDYELQSSKKGVSR YWTPSIKKFIRELSEAESEKDAKLKSILHRLIIRFCEHHDKWRQLVSTTAELDVLISLAI ASDYYEGPTCQPTITGLSNSDEVPHLAARNLGHPVLRSESLGKGTFVPNDVNIGGPDCAS FILLTGPNMGGKSTFLRQVCLAVILAQVGAYVPAERFNMSPVDCIYVRMGAKDHIMAGQS TFLTELVETSSMLSSATRNSLVALDELGRGTSTSDGQAIAESVLQHFVNKVRCRGMFSTH YHRLALSNHNDPKVSLCHMACQVGEVQGLEEVTFLYKLTLGACPKSYGVNVARIAGLPVA VLKRAVTKSQDFEGMYGKQGKQFDTSNGSWEDNLLIFIRNLINLSAEKNCNEGGVANTLG ELQHRARILLEQS NT seq 3822 nt NT seq  +upstreamnt  +downstreamnt atgtcgaactcgcgccggtcgagcaacggccgatcgccgctggtgaatcaacaacgacag atcacttcatttttcaccaaatcaccttcttccacgccttccccctcttccattctcccc aaatcgcattccaaattgaaccctaaccctaaccctaaaattacttctaaattgagccct gcctctactactactccttcacctagtcagagtaaacggagtaagccagtactggtgatt ggtcccactcattctccgattacgccgcggagattggtggatgaggatgcggttgggaag agagtcaaggtttattggccgttggataagatgtggtatgaaggctgtgttaagagtttt gatatggagagtgggaagcatttggtgcagtatgaggattcggaggaggagcttttggat ttgtcgaaggagaaggttgagtggattgaggaggggagtgttaagaagtttcggaggttg aggaaaatgtcggtggtggaggacgaggaggaggagaaggtggagagtggtggagatggg gatgattcaacggatgaggattgggggaagaatgcggagaaagaagttgttgaggatgag gaggagagcatggagctggatgacgaggatgaggagggagggagtagtgtgaaaaagatg ccggttaagaaatttgagtttaagaaacggaaaaatgggggagtagatgaagcgagttcg tgtaaaaagagcagaagtggtgtggatgttggtagaaacaaattgattaatcaaattaat aatgaaagtggaaagggatctgtgctttctgacaagtgtccgacgagtgatgctgcagag aggtttggtatgcgagagatggagaagttcaagttcctttcagagaatcgcagggatgcc aataaaagacgtcctggagatgtaaattatgatccaaaaactttatacttgcctcctcag ttcctgaatagtttaacaggaggtcagaaacaatggtgggagtttaaatcaatgaatatg gacaaggtcctattttttaagatgggcaaattttatgagctgtttgagatggacgctcat gttggtgcgaaagaacttgatttacaatatatgaagggagctcagcctcattgtggattt ccagagaagaatttctcaatgtatattgaaaaactggctcaaaagggataccgggttctt gttgtggaacagacagaaactcctgcacagcttgaccttcgtcgcaaagagcaaggttcc aaagataaggttgttaaaagagagatatgtgcagtagtcactaaaggaacattaactgag ggggaaatgcagttggcaaatcctgatgcttcttacataatggcggttgctgaatgctgc cgatctttctcaagcgaagaatgtcgaatatatggtgtttgtgtggttgatgttgctaca agcaaaattcttcttggacagttcgaggatgatacagagtgcagtgttctgagctgttta ctgactgaactcaggcctgttgaaataataaaacctgctaagttgcttagcctagaaact gagagagtacttcagaggcatacaagaaatcctttagtaaatgagttggtccctctctca cagttctgggatgctgaaagaactgcctgtgaagtcaaggatatctacaagcgtataaat ggatcactttctcatgctactgattcttctggtaaagagagggacctgaactacctaccg gaggttctatctgagcttgtggctgcaggtgataaaggcatgcatgcactctctgctcta ggaggcactattttctacctgaagcaggcctttcttgacgagactttgcttaggtatgca acatatgaggtgcttccatgctcaggtggcagtgatatatcacgaaaaccatatatgatt cttgatgctgctgcattggagaacctagagatatttgaaaacagtagaaacggaggttct tcagggacattgtacgctcagttgaaccactgtataacagcatttggaaagaggttgcta aaaacatggcttgcacgacctttataccaaatagatctgatcaaagaacgccaggatgca gttgcagccctgaaggctaatctatcttctgcaattgaattccgcaaagaattgtcgaga ctaccagatatggaacggttgctggcccgcatctttgctggaagtgaagcttgcggtagg aatgcaaataaagtggttctatatgaggatgcttcaaaaaaacaacttcaggagttcata tcagctcttcgtggttgtgagttgatgaaccatgcctgctttatacttggtggcactctt gaaaacattaattttgggccattacatcacttattaacacctggtaaagggcttcctaat gttcaatccatcttgaagcattttaagaatgcattcgattgggttgatgccaataattca ggccgtataatacctcgggagggagccgatgaggagtatgattctgcctgccaagcagtt caagggattgaatccaatttgaacaaacatctgaaggaacagagaaaagttcttggagat acatcaataaattatgtaaccataggaaaagacgcataccttttggaagtacccgaaagt ttgtctagtagtgttccccgagattatgagttacaatcctccaaaaagggtgtttctcgg tactggactccgtctattaagaaatttataagagagctttctgaagctgaatctgagaaa gacgctaagcttaaaagcattttacataggttgataatacgattttgtgagcatcatgat aaatggaggcagttggtatctactactgcagaacttgacgtgttaataagtttggcaatc gcaagtgattactacgaaggaccgacctgccaaccaactatcactggattatctaattca gatgaagtcccacaccttgctgctagaaatttagggcatcctgttctcagaagtgaatct ctaggcaagggtacctttgtccctaatgatgtaaatattggaggtcctgattgtgcgagc ttcatcctgcttactggtcctaacatgggtggaaaatcaaccttcctacgccaagtctgc ctggcagtaatattagcccaagttggagcatatgtccctgcagaaaggtttaatatgtct cctgttgattgcatttatgttcggatgggtgcaaaagatcacataatggctggccaaagt acatttttaacagagctcgtagaaacctcatcaatgctgtcgtctgcgacccgcaattca cttgtggctttggatgagcttggaagagggacatcaacttcagatggacaagccatagct gaatcagttcttcaacattttgtcaataaggtacgctgtcgagggatgttttctactcac tatcatcggttagctctatccaaccacaatgatccaaaggtctccctttgtcacatggca tgccaagtaggagaagtccaaggcctggaggaggtgacctttctatacaagttgactctt ggtgcatgtcctaaaagttacggcgtcaatgttgcgaggatagctggactacctgtcgct gtactaaaaagagcagtgaccaagtcacaagattttgaaggaatgtacggtaaacaagga aagcagtttgatacttccaatggaagttgggaagataatttattaatctttatccggaat ttgattaatttatcggcagagaagaattgcaatgagggtggtgtagctaacacgttaggt gagctgcagcatagagcaaggatacttctggaacagagttag

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