Daucus carota (carrot): 108223222
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Entry
108223222 CDS
T05350
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108223222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108223222
Spliceosome [BR:
dcr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108223222
Complex B
108223222
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
108223222
NCBI-ProteinID:
XP_063949279
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All DBs
Position
5:13659225..13665520
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AA seq
377 aa
AA seq
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MGDYNDSFMRNGANVQGRVKNQNQNRADVLEAKALASGHPTGLTNNLLRLFEPRPPLEYK
PPLQKNKCPPYTGMAQYVKDFAEPSQPDYAKPLEKSETPAQRRARVHQIRLVAGAKKAAE
ELEKYDPSNDPNVSGDPYKTLFVARLNYETTESRIKREFEAYGPIKQVRLVADKETNKPR
GYAFVEYRHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE
DVNQMYSARAQHRSAGPPRSEEPRVRDDRKRDREKSRERGKDRVREHDRHRERDHRDDRH
HRDRGRTRERDIGRDRTRDRDRGREREDRDRGRDRYREERDRGRDNELTEDRGLSHDKNY
DHDRVEVLSVDLQRGGW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacaacgattcgttcatgcgtaacggcgccaacgtgcagggccgcgttaag
aatcagaatcagaatcgtgctgatgttttggaggcgaaagcgcttgcctcaggtcatcca
actggtttgacaaataaccttttaaggctatttgagccaaggcccccacttgagtacaaa
ccaccgttgcagaagaacaaatgcccgccatatacaggaatggcgcagtatgttaaagat
tttgctgagccgagtcaaccagattatgccaagccattggagaagagtgaaactcctgca
caaaggagggcaagggtccaccagataaggctggtagcaggtgcaaaaaaggctgccgag
gagcttgaaaaatatgatccaagtaatgatccaaatgtttctggagatccatacaagaca
ctatttgtggctaggctgaactacgagacaactgaaagcagaatcaaaagggagtttgag
gcttatggtccaattaaacaggttcgcttggttgcagataaagagacaaacaaaccaaga
ggctatgcttttgtagaatataggcatacaagagatatgaaagctgcttataagcaagct
gatggaaggaagcttgataatcgaagggttctagttgacgttgagcgtggcagaacagtt
ccaaattggcgacctcgtaggcttggtggtgggcttggcacaactagggttggaggtgaa
gatgttaatcagatgtactctgcaagagctcaacatcgatcagctggaccacctcgatct
gaggagccaagagttcgagatgaccgcaaaagggacagggagaagtctcgtgaaagaggt
aaggatagagtaagggaacatgataggcatagggaacgtgatcatagggatgatagacac
catagagatcgtggaaggaccagagaaagagacatcggtcgagatcggactagagaccga
gaccgtggtagagaacgtgaagatcgtgatcgtggtcgtgaccgttatcgcgaggagagg
gataggggtcgggataatgaattgacagaggatcgtggtctctcccatgacaaaaattat
gatcacgaccgtgttgaggttctgtctgtggacttgcagcgggggggatggtaa
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