Daucus carota (carrot): 108223232
Help
Entry
108223232 CDS
T05350
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108223232
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223232
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108223232
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108223232
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108223232
Ion channels [BR:
dcr04040
]
Chloride channels
Chloride channel (CLC)
108223232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
108223232
NCBI-ProteinID:
XP_017252867
UniProt:
A0AAF0X2Y7
LinkDB
All DBs
Position
5:11544038..11551232
Genome browser
AA seq
784 aa
AA seq
DB search
MEEGKSWESDDDQVSDVENDAAASFGVNGVDRYWSDMSERNMSYREPLIKRRMNTTSQIA
IVGVNVSPIESLDYEIIENELFKQDWRSRKKIQIFQYISLKWAFALLIGVGTGLVGFFNN
IAVENLAGYKLLLTTDLMSEQKYYKAFLAYAGCNVVLATAAAVLCAYIAPAAAGSGIPEV
KAYLNGIDANSILAPRTLFVKIFGSIFGVSAGFVVGKEGPMVHTGACIASLLGQGGSKKY
HLTWNWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFF
TTAVVAIVLRAFIEYCGTGKCGLFGQGGLIMFDVSSATASYTVPDILAVLFLGVIGGIFG
SIYNYLVDKVLRTYSIINEKGAIFKVILVIAISLLTSCCAYGLPWLAHCIPCPEHLKVSC
PTVDGSGNFKRFHCPPGHYNDLASLFLNTNDDCIRNLFSTSTEKEFHISSLFIFLVAIYF
LGIITYGIAIPSGLFIPVILAGSSYGRLVGRLFAPFSKLDMGLFSLLGAASFLGGTMRMT
VSLCVILLELTNDILLLPLVMLVLLISKSVADTFNKGVYDQILKLKGLPYLESHAEPYMR
NLVARDVVSGPLITFSGIETVGAILHALRTTGHNGFPVIDEPPLTDVPELCGVVLRSHLL
VFLKEKYFSGVKVLSGKEILQRFDASDFAKAGSGKGLTLEDLDIKEEELEMFVDLHPITN
TSPFTVVETMSLAKAAILFRQLGLRHMCVVPKAQGRPPIVGILTRHDFMPEHVLGLYPRL
NPHK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggaaaaagttgggaatcagatgatgatcaggtcagcgatgttgagaatgac
gcggctgcatcttttggtgttaatggtgttgataggtattggtcagacatgtcagaaaga
aatatgtcgtacagggaaccacttataaaaaggaggatgaacaccacctcccagattgcc
attgttggtgtgaatgttagccccattgaaagcctggattatgagattattgaaaatgaa
ctatttaaacaagactggcggtcgaggaaaaagatccagatatttcagtatatttctctg
aaatgggcatttgccctcctcatcggtgttggaactggacttgttggattttttaataac
attgctgttgagaacttagcgggatacaagttgttgctgaccacagacctcatgtctgaa
caaaaatattacaaagcatttttagcatatgctggttgcaatgtagtattggcaactgct
gcagctgtcctttgtgcgtatattgctccagcagcagcagggtctggcattcctgaggtg
aaggcatatcttaatggaattgatgctaattctatattagccccacgtacactattcgta
aagatatttggttccatttttggtgtttctgctggatttgtggtgggtaaagaagggccc
atggtacacacaggtgcctgtatagcttcattgcttggacagggaggaagtaaaaaatat
cacctgacatggaattggcttagatacttcaaaaatgatagagaccggcgagacttaatt
acctgtggtgctgctgctggtgtagctgcagcttttcgggctccagttggtggggtcctg
tttgctcttgaagaagcagcttcatggtggcgaagtgctcttctctggagaaccttcttc
acaacagctgtagttgctatagtattgagagctttcattgaatactgtgggactggaaag
tgcgggctattcgggcaaggtggtcttataatgtttgatgtcagttcagcaactgcatca
tatacagttccagatatactagcagtactgttccttggtgttattggaggtattttcgga
agcatatacaattatctggtggacaaggttctccggacgtatagcatcattaatgagaaa
ggtgctatttttaaagtaatactggtgatcgctatctctctgctgacatcgtgttgtgct
tacgggctcccatggctagcacattgtattccttgccccgaacatttaaaagtaagctgc
ccaacagttgatggatctggtaatttcaaacgcttccactgcccaccgggtcactacaat
gaccttgcctcgctcttcctgaacactaatgatgattgtattcgcaaccttttcagcacc
agcactgaaaaagagtttcatataagcagtctcttcatattccttgttgctatttatttt
ctaggaattattacttatggaattgctattccatctgggctcttcatcccagtgatatta
gctggatcttcgtatggtcgtcttgttggaagactctttgcacccttctctaaacttgac
atgggactgttttccctcctaggagcagcctccttcctcggtggtactatgagaatgaca
gtttccctttgtgttatacttcttgaactaaccaatgatatactattgctccctcttgta
atgttggtcctgttgatttccaaatctgtggctgataccttcaacaagggtgtctatgat
caaatattaaaactaaaaggcttgccttatctggagtcacatgcagaaccttacatgagg
aatttggttgcccgcgatgttgtttctgggcctttgattacattttctggcatagagaca
gttggagccattttacatgcccttaggacaacagggcacaatgggtttcctgtgatagac
gaaccaccattgaccgatgttccagaattgtgtggggttgttctgaggtctcatttgctt
gtatttctcaaggagaaatatttctccggtgtcaaggtgcttagcgggaaagaaattttg
caaaggtttgatgcatctgattttgccaaggctggatcaggaaaaggtcttacacttgag
gatctagatattaaagaggaagaactggaaatgtttgtcgatcttcatcctattacaaat
acttccccttttacagtggtagagacaatgtcactggctaaagctgcaattctctttcgc
caacttggactcaggcatatgtgtgttgtaccaaaagctcaagggaggccccctatagtt
ggaatcttgacacgccatgacttcatgccagagcacgtattaggactttatcctcgactg
aatcctcacaagtag
DBGET
integrated database retrieval system
