Daucus carota (carrot): 108223235
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Entry
108223235 CDS
T05350
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme isoform X1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00500
Starch and sucrose metabolism
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108223235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108223235
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
108223235
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108223235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
DUF5696
Motif
Other DBs
NCBI-GeneID:
108223235
NCBI-ProteinID:
XP_017252873
UniProt:
A0AAF0X1H5
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Position
5:complement(7444420..7451223)
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AA seq
781 aa
AA seq
DB search
MALVSLTPFSTQLASFKKESRNKWFVAYQHPRGLSCGPWKSIEYQQYLYSTRSSKFGRVE
QRPSISAVLTDENSDMMQMEEDTETVAVLDLDPGLQPYKDHFRYRMKRYIEQKKLIEKYE
GSVENFAQGYLKFGFNREKGVIVYREWAPAAQEAQIIGDFNAWDGCNHKMEKDQFGVWSI
TIPDSGEKAGIPHNSRVKFRFKHAGGVWVDRIPAWIKYATVDAARFAAPYDGVYWDPPHS
ERYEFRYPRPLKPTAPRIYEAHVGMSGSEPRVSSYREFADDVLPRIKKNNYNTVQLMAVM
EHSYYGSFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASNNVTDGLN
GYDVGQSSQESYFHTGDRGYHQLWDSRLFNYANWEVLRFLLSNLRWWMEEYRFDGFRFDG
ITSMLYHHHGINMAFTGNYNEYFSESTDVDAVVYLMLANNMIHNLLLDATVVAEDVSGAP
GLGRPVSEGGIGFDYRLAMAIPDKWIDYLKNKEDKEWSMEEISWSLTNRRYTEKCIAYAE
SHDQAIVGDKTIAFLLMDQEMYSGMSALGPASPAIDRGIALHKMIHFITMALGGDGYLNF
MGNEFGHPEWIDFPREGNNWSYDKCRRQWNLVDEDHLRYKFMCAFDRAMNMLDEKFAFLA
SHKQIVSCANDEDKVIVFERGDLVFIFNFHPENTYDGYKVGCDMPGKYRVALDSDALEFG
GHGRVGHDVDHFTSPEGIPGVPETNFNNRPNSFQILSPPRTCLVYYRVEEGNKTTSVEAI
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtgtctttaacacccttttcaactcaactagcttctttcaaaaaggaatcg
aggaataagtggtttgttgcctatcagcatccgcgtggactaagttgtggcccttggaaa
tcaattgaatatcagcaatatctttattcaacaagatcgtcaaaatttgggagggtggaa
caaaggccttctatctcagctgttttgactgatgaaaactctgatatgatgcaaatggaa
gaagacactgagacagttgctgtgctggatctcgacccaggattgcaaccatataaagat
cactttagatatagaatgaaaagatacatagagcagaaaaagctaattgaaaaatatgaa
ggaagtgttgaaaattttgcccaaggttatttaaaattcggttttaacagagaaaaaggt
gtcattgtataccgtgaatgggcccctgctgctcaagaagcacaaatcattggggatttc
aatgcatgggatggatgtaatcacaagatggaaaaagatcaatttggtgtttggtctatt
acaattccagattctggtgagaaggcaggcattccacataattcaagagtcaagtttagg
ttcaagcatgccggtggagtttgggttgacaggatcccagcttggataaaatatgctact
gtggatgcagcgaggtttgcggcaccttatgatggtgtatactgggacccgccacattct
gagaggtatgagttcagatacccccgtcctctaaaacctacagcaccacggatttatgag
gctcatgtcgggatgagtggttcagaaccccgtgtaagttcataccgagaatttgcagat
gatgtcttacctcgtattaagaaaaacaattataacacagtccagttgatggccgtgatg
gagcattcctactatggttcctttggatatcatgtcacaaactttttcgctgtgagcagt
aggtcgggaacccctgaagaccttaagtatttgatagataaagcacacagcttaggttta
cgggtactgatggatgttgttcacagccatgcaagcaacaatgttactgatggccttaac
ggctacgatgttggccaaagttctcaagaatcgtacttccacactggggaccgtggctac
caccagttgtgggatagcagactttttaactatgctaactgggaggttcttcgtttccta
ttatctaacttgagatggtggatggaggagtacagatttgatgggtttaggtttgatgga
ataacttcaatgttgtatcatcatcatggaatcaacatggctttcacaggaaattacaat
gaatattttagcgagtcaacagatgttgacgcagtggtttacctgatgctggctaacaat
atgatacacaatctcctgctggatgcaactgtggttgcagaagatgtttctggtgcgcct
ggacttggtcggcctgtttccgagggaggaattggttttgattatcgtctggcaatggct
atacctgacaagtggattgattacttgaaaaataaggaagataaagagtggtctatggag
gaaatatcatggagtttgactaataggagatacacagagaagtgtatagcttatgctgaa
agtcatgaccaggctatagtgggagacaagactattgcatttctacttatggatcaggaa
atgtattcaggcatgtcagctttaggacctgcttctccagcaattgatcgagggatagca
cttcataagatgattcactttattacgatggctttaggaggggatgggtatctaaatttc
atgggaaatgagtttggccatccagagtggatagacttccccagagaaggcaataactgg
agttacgataagtgccgacgccagtggaatctggtcgacgaagatcacctgagatataag
ttcatgtgtgcttttgatagagctatgaatatgctggatgagaagtttgctttcctagca
tcacataaacagatagtgagctgtgcaaatgacgaggataaggttattgtatttgaacga
ggagatctagtttttattttcaactttcatccggagaacacatatgacgggtataaagtt
gggtgtgacatgccgggaaaatatagagttgcactggatagtgatgccctggagttcggt
gggcatggaagagtgggccatgatgtagatcatttcacgtctccagagggaatacccgga
gtccccgaaacaaacttcaacaaccgtcccaactcattccaaatactctccccacctcgt
acatgcctggtctattatagagttgaagaaggcaataaaacgacatctgtcgaagccatc
gagtag
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