Daucus carota (carrot): 108223238
Help
Entry
108223238 CDS
T05350
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108223238
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108223238
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108223238
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223238
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108223238
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108223238
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108223238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
108223238
NCBI-ProteinID:
XP_017252880
UniProt:
A0A164ZW67
LinkDB
All DBs
Position
5:46821570..46828040
Genome browser
AA seq
546 aa
AA seq
DB search
MIKQIFGKRKASSKSSSQSDSSNDVGYSSINTSSSAGGGVGNSTKTTSVSGKGANSASAA
LKSSNGNYAPQSSSAAIVSNQGKKSGPGGSQAGQGMNYGVYEALPSFRDVPSSEKQNLFL
RKLDMCCVLFDFSDASKNLKEKEIKRQTLLELVEYISSATSKFNEVTMQEITKMVAANLF
RAFPSSHDNKLPDVYDPEDDEPAMEPSWPHLQVVYEFLLRFVASTETDAKLAKRYIDHSF
VLRLLDLFDSDDQREREYLKTILHRIYGKFMVHRPFIRKSINNIFYNFISETVRHNGIAE
LLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKSVSMYHQQLSYCITQFVEKDIKLAD
TVIRGLLKYWPITNSSKEVMFLGELEEVLEATQAAEFQRCMVRLFCQIGRCLNSSHFQVA
ERTLFLWNNDHIRTLITQNRKIILPIIFPALENNTRSHWNQAVHSLTLNVRKIFIDADQA
LFDECLAKFQEEEMKGKEKLEKRELTWKRLEDMAASKAVTNEAVLVSKFSSVAIATSTNS
PKAASS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcagatatttggtaaacggaaggcatcttcaaaatcatcttcgcagagtgat
tcaagtaatgatgttgggtattcatccataaatacttcgagttcagccggtgggggtgtt
ggtaattctactaagactacttctgtatcagggaaaggtgcaaattctgcttctgcagct
ttgaaatcaagtaatgggaattatgccccacaatcgtcgagtgctgctattgtatcgaat
caagggaagaagtcaggtcctgggggttctcaagctggccaggggatgaattatggtgta
tatgaagctttgcctagctttcgggatgttcccagctctgaaaagcagaatttgttttta
aggaagttggatatgtgttgcgtgttgtttgattttagtgatgcttctaagaatctgaaa
gagaaagagataaagcgacaaactttgcttgaacttgttgaatacatatcgtcagcaact
tccaagtttaatgaagtcaccatgcaggagatcacgaaaatggtagctgcgaatcttttt
cgagcctttccgtctagtcatgataacaaactaccagatgtgtatgatccagaggatgat
gaaccagccatggaaccgtcatggcctcatcttcaagttgtgtatgagtttcttttgaga
tttgtggcttctactgaaacagatgcaaaacttgcaaaaagatatattgaccattccttt
gtgttgagattacttgatctttttgactcggacgatcaacgagagagggagtacttgaag
acaattcttcatcgcatatatgggaagttcatggtgcaccggccatttattaggaaatcc
atcaacaatattttttacaattttatatctgagactgtgcgacacaatggaattgccgaa
ttgcttgaaatcttgggtagtataattaatgggtttgctttacctttaaaggaagaacac
aagcttttccttgttcgtgccttgattccccttcacaaacctaaaagtgtatcaatgtac
caccagcaactttcttattgtattacccaattcgtggagaaggatattaagctagctgac
acagtaattcgaggtttgttgaagtactggcctataactaatagttcaaaagaagtcatg
ttccttggtgagctagaggaagttttggaagctacccaggctgcagagtttcagaggtgc
atggtccgtctgttctgtcagattggtcgctgccttaatagctcacatttccaggtagct
gaacgaacgttgtttttgtggaataacgatcatataaggactctgattacacagaatcgc
aagatcatactgccaattattttcccagccttggagaacaatactcggagtcactggaac
caagctgttcatagtttgacgctgaatgtgagaaaaatatttatagacgcagatcaagca
ctttttgatgagtgcttagctaagttccaagaagaggaaatgaaaggtaaagaaaaactt
gagaagcgcgaattaacttggaagcgcttggaagatatggcagcatccaaggctgtaacc
aatgaggcagtgctcgtttcgaaattttcttccgtggccattgccacaagcacaaattcg
ccgaaggccgccagtagttga
DBGET
integrated database retrieval system
