Daucus carota (carrot): 108223368
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Entry
108223368 CDS
T05350
Name
(RefSeq) syntaxin-121
KO
K08486
syntaxin 1B/2/3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108223368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223368
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108223368
Membrane trafficking [BR:
dcr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108223368
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108223368
Exosomal proteins of other body fluids (saliva and urine)
108223368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Alpha_Helical
SARAF
Synaptobrevin
DUF5790
Ly49
AvrL567-A
Enkurin
ZapD
DUF4410
Int_N
TMPIT
Motif
Other DBs
NCBI-GeneID:
108223368
NCBI-ProteinID:
XP_017253064
UniProt:
A0AAF0X3W2
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All DBs
Position
5:9011447..9013124
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AA seq
340 aa
AA seq
DB search
MNDLFSGSFSRFRNEDDGQSPHHVIEMSSSTPTASVNLDKFFEDVESIKEELKDLESLYN
QLHTSHEQSKTLHNAKSVKTLRSKMDQDVAASLKKAKLIKVRLEALDRSNAANRSLPGCG
PGSSSDRTRTSLVSGLRKKLQDSMNSFNDLRQLMALEYRETVQRRYFTVTGENADEKTVD
TLISTGQSESFLQKAIQEQGRGRVMETIMEIQERHDAVKEMEKNLVELHQVFLDMAVLVE
TQGEQLDNIQDQVERASSFVRGGTQHLEVARKTQKNTRKWYCYGIILLLIVLAIIIFSIR
PWESNGGGGGGGGGGGGGGGGGNNNNNNSNSGAVPPPPAK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctattctccggctcgttctctagattccgcaacgaagacgacggtcaatca
ccgcaccatgtaatcgaaatgtcctcctccactcccaccgcctccgtcaatctcgacaag
tttttcgaagatgtcgaatccatcaaggaagaactcaaggatctggagtctctgtacaac
cagctgcacacatctcacgaacaatccaaaacactgcacaacgcgaaatcagtcaagact
ctgagatcaaagatggaccaggacgtggcggcgtcgctgaagaaggcgaagctgattaaa
gtccgcctggaagccctggaccggtccaacgccgcgaaccggagtctccctggctgcggt
ccaggcagctcatcggaccggacgcgcacatctctcgtctccggtctgcgcaaaaagctc
caggactcgatgaactcattcaacgatctccggcagctgatggcgctggagtaccgcgaa
acagttcagcgccggtacttcaccgtcaccggcgagaacgccgacgagaagacggtggac
acgctgatctcgacgggacagagcgagagtttcctccagaaagcgatccaggagcaaggg
agagggcgagtgatggagacgattatggagattcaggagcggcacgatgcggtgaaggag
atggagaagaatctggtggagttgcatcaggtgtttctcgatatggcggtgctggtggag
acgcagggagagcagttggataatatacaggatcaggtggagagagcgagctcatttgtt
agaggtggaacgcagcatcttgaagtggcgaggaagactcagaagaacacgaggaagtgg
tattgttacggtattattttgttgctaattgtgctggctattatcattttttcgattcgt
ccttgggagagcaacggtggtggtggtggtggtggtggtggtggtggcggtggtggcggt
ggcggaaataataataataataatagcaattccggtgcggtgccgccacctccggcgaaa
tga
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