Daucus carota (carrot): 108223413
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Entry
108223413 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108223413
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108223413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108223413
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108223413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D3
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
108223413
NCBI-ProteinID:
XP_063949430
LinkDB
All DBs
Position
5:complement(14104403..14115521)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAREAFTDSMNLKVQELLKEVKLNYSPATTKHVDDVVSSIRQVIDKIPDDIQVTADLAPG
FVKDIRADKVNFKFKKPKSIEITGSYSYKCIARPDVNVDVFVQLPKECFHEKDYLNYRYH
AKRCLYLCLIKKYLKRSSLFQKVEMSAFQNEARKPVLVLYPAENFGETPLTSIRLIPTVT
SLFNVSKLNMQRNNIRASNQAVDATPMYNSSILEDMALEENANFISSTFHEWKELGEALV
LLKVWARQRSSIYSHDCISGYLLSTIMAYLATVSGKNRISKSMNTIQICRHTLDFIANSG
VWKKGIFFKHKVENNILTEEEREIYLQSFPAVLCHSSQFNVAFRMSKSGLQELQDEASLA
RNCLDKCRDGGFDELFITSIDFAVKFDHCIRLNLKVNVQDDAPGFSLDNECWRTYEHKVH
SLMQEALGERVKLVRVIWRNMASECNFENGLSTFDREALKIGILLNKDEAFNMVVKGPNS
ENEDEVQKFCRFWGNKAELRIFKDTGIRYCAAWECKPSELHLVMKRITEHILVKHLSLLR
ENITYIVDQLDFSLVLGNEDPTCYNGHLLEAFNKLSKHLRELNDIPLTISSVQPLDPAFR
GTSVCPRQPHPLASKDYVNRKKIKFSPTCIQPVEVLIQLEGSGNWPVDDVAIEKTKSAFI
LKIGESLQKNFNMRFTATEDDVDVLFSGYAFRLKILHQKGLNLVNRQSKIDQNKRISSTD
RKLFLLSQHASMINGLRGRYPIFEPVVRLAKRWVSAHLFSAVLADEAVELLAAYLFTNPL
PYSVPCSRITGFLRFLRLLSEYDWTFSPLVVDINGDLNPDDMKEINEKFNLSRDTSGEET
RSTHSAMFLATTYDKFSEAWSTSSPSSMELKRLAAYARSSSNLLTKLVLQDQLDSYGWEC
ILRTPLNNYDAVILLHRDKLPYPERLLFPSEVNQGKLVVQAKASKLFQPFISSVDTKVNI
EELQRKLMVDFDPSRCLIEDLERRFPDCFKVWYDSLGGDAIGVTWNQEGLKKRGRDAGKE
EINLLDELKAVGHVGKGFVRKIYSLKAPRLN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggctagagaagctttcacagactccatgaacctaaaagttcaagagctcttaaaggag
gttaagttaaactactctccggccactactaagcacgtcgacgacgtcgtttcatccatt
cgacaagtcattgataaaatccccgatgatattcaggttactgctgacctggcaccaggt
tttgttaaagacattcgtgctgataaagtgaatttcaagtttaagaagccgaaatcgatt
gaaattactggcagttattcgtacaaatgtattgcgagacctgatgtgaatgttgatgtt
ttcgttcaattgcctaaggaatgtttccatgagaaagactatttgaattatcgataccat
gccaaaaggtgcctatatctttgtctgattaaaaaatatttgaagcgttcttcactattt
caaaaagttgaaatgtctgcctttcagaacgaggctcgaaaacctgtacttgttctgtat
ccagctgaaaactttggtgaaactccattgacttcaataaggctgattcccaccgtaaca
tctctctttaacgtttctaagcttaacatgcaacgcaataatatccgtgcatcgaaccaa
gctgttgatgctacacctatgtacaatagcagtattttagaagatatggcgttggaagag
aatgcaaactttatcagcagtacatttcatgaatggaaggaattaggcgaggccctagtt
ttgttaaaggtctgggctcggcagagaagttctatatattctcatgattgcataagtggg
tacctgttatctactattatggcatatcttgcaacagtttctggtaaaaatcgcatcagc
aagtcaatgaacacgattcagatatgtcgtcatacattggatttcattgccaattcaggt
gtatggaaaaagggtatttttttcaaacacaaggtggaaaacaatatactaacggaggag
gaaagggagatatatttgcagtcatttcccgcagttctctgtcattcctcacaatttaat
gttgcattcagaatgtcaaaaagtggtttgcaagagcttcaagatgaggcttctctggca
agaaattgcttggataagtgcagggatggtggatttgatgaattgtttattaccagcatt
gactttgctgttaaatttgatcactgcattagattaaacttgaaggtaaatgtacaagat
gatgcgcctggattttctctggacaacgagtgttggagaacttatgagcataaggtacat
tcattgatgcaagaagcattaggagaaagagtgaagttggtgcgagttatctggagaaac
atggcatcagagtgcaattttgaaaatggtttatcaacgtttgatagagaggcactgaaa
attggaattttactcaataaagatgaagcttttaatatggttgtcaagggtcccaattct
gaaaacgaagacgaggttcaaaagttctgtagattttggggaaataaggcagaacttcga
atttttaaagatactggaatcagatattgtgctgcttgggaatgcaagccatccgaattg
catcttgttatgaaacggattacggagcatatattggtgaagcatctatcactgttaaga
gaaaacatcacttacattgtggatcagcttgatttttctttggtactggggaatgaagat
ccaacatgttataatggacatttgcttgaagcatttaacaaactttcaaagcacttgcgt
gagctcaatgacattcctttaacaatatctagtgtgcagcctctcgatccagctttcagg
ggcacatctgtctgcccgcggcagcctcatccattagcttctaaagattatgtcaatagg
aaaaagataaaatttagtccaacttgtatacaaccagtggaagttcttatccagttggaa
ggttctgggaattggccagtagatgatgttgctattgaaaagaccaaatctgcttttatt
ctgaaaataggggagagtctccaaaagaattttaatatgagatttactgctactgaggat
gatgtggatgttctcttttccggatatgcattccgtctgaaaatactgcatcagaaaggc
ctgaacttggtgaacagacaatccaaaattgatcaaaacaaaaggatctcttccacggac
aggaaactttttcttctcagccagcacgctagcatgattaatggtttacggggccggtat
cctatatttgagcctgttgttcggctcgctaagcgttgggtttctgcgcacctcttctcg
gctgttttagcagacgaggcagttgagctactagctgcatatctatttaccaatcctctg
ccgtattctgttccatgttcacggattactggatttttaagatttctgcgtctactctca
gagtacgattggactttttctcctttggttgttgacataaatggtgatcttaatccagat
gatatgaaggagataaatgagaaattcaatttaagtagagacacatctggagaagaaacg
agaagtacacattctgccatgtttttggcaacaacttatgataagttctctgaagcatgg
agcacatcatctccgagctcaatggagctcaaaagactggcggcatatgcaagaagcagt
tcaaatctgttgaccaagttagtattgcaggatcaacttgattcttatggctgggagtgc
attcttcgtactcctttgaacaactacgatgcggttattctgctccacagagacaagttg
ccttaccctgagcgccttctcttcccatctgaagtcaatcaagggaaactagtggtccaa
gctaaagcaagtaagctatttcaaccgttcatttcttctgtggatacgaaagtgaacata
gaagaactccaaagaaagctgatggtagattttgatccatcaaggtgtttaattgaagat
ctggagaggagattccccgattgctttaaggtgtggtatgattccttaggaggtgatgca
attggtgttacgtggaatcaagagggtttaaagaaacgcggacgagatgctggaaaggaa
gaaataaacctactcgatgaactaaaggccgttggtcatgttgggaaaggttttgtgagg
aaaatctactctctaaaagcacctaggcttaattag
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