Daucus carota (carrot): 108223418
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Entry
108223418 CDS
T05350
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00052
Galactose metabolism
dcr00511
Other glycan degradation
dcr00531
Glycosaminoglycan degradation
dcr00600
Sphingolipid metabolism
dcr00604
Glycosphingolipid biosynthesis - ganglio series
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108223418
09103 Lipid metabolism
00600 Sphingolipid metabolism
108223418
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108223418
00604 Glycosphingolipid biosynthesis - ganglio series
108223418
00511 Other glycan degradation
108223418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108223418
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108223418
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108223418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
108223418
NCBI-ProteinID:
XP_017253171
LinkDB
All DBs
Position
5:689651..698664
Genome browser
AA seq
675 aa
AA seq
DB search
MAILHIHFKFTTITWIFFFFSSLSCSTSHLLHNAHTRKFEIADDMFWKDGKPFRIIGGDL
HYFRVLPEYWEDRLLRAKALGLNAIQTYVPWNLHEPRQGQLVFEGIADLVAFLKLCQKLD
FVVMLRAGPYICGEWDLGGFPAWLLSIEPAVRLRSSDPAFLHLVDNWWGILLPKMAPLLY
SNGGPIVMVQIENEFGSYGDDKSYLHHLVKLARSHLGEELTLYTTDGGSRETLQKGTIRG
DAVYSAVDFTTGDDPWPIFELQKEFNAPGKSPPLSAEFYTGWLTHWGENIAHTDAKSTAA
ALGKILEKNGSAVLYMAHGGTNFGFYNGANTGEGESDYKPDLTSYDYDAPISEFGDVDNA
KYKALRRVIEKYSAVSLPPLPRNNKKTGYGNFRLQRTAFLFDMLNKTDHADILKSDDPVS
MEVFGEMFGLVLYASEYIHKGKKSILSIPKVHDRAQVFVSCSTKNKQARPKYAGTIERWS
NQAIRLPNLSCTSPIKLLILVENMGRVNYGPYMFDRKGILSSVYLDGQPIHKWKMLSVPF
QKIPEVKKISPILKDALSDNIKISSHRKLKINLDSISKQPAFYVGSFAVGEVHDSFISFT
GWGKGIAFVNGFNIGRYWPTKGPQCNLYVPAPVLHRGQNVVVILELESPNPDLLLSSVDD
PDFTCGTKSSKVHQL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttgcatattcactttaaattcactacaataacctggatcttcttctttttc
tcatctctctcctgctccacttcacacctgctgcataatgctcatactcgaaaatttgag
attgctgatgatatgttctggaaagatggcaagccttttcgaatcatcgggggtgatctt
cactattttcgtgttcttcctgagtactgggaagatagactcttgcgggcaaaggcattg
ggtttaaatgctattcaaacttatgttccttggaatttgcatgaaccaaggcaaggccaa
cttgtttttgagggtattgcagatttagtcgcatttctaaaactgtgccagaagctggat
tttgtggttatgcttcgagctgggccttacatatgcggagaatgggatttgggtggtttc
ccagcttggttactttcaatcgaaccagctgtgagacttagatcatcagacccggctttc
cttcatttggttgataattggtggggtatcttactccccaaaatggctcctcttctctat
agcaatggaggtcctatagtaatggttcagatagaaaatgaatttggttcgtatggagat
gacaaatcatacttgcatcatctggtaaagttagccagatcacaccttggagaagagcta
acattgtataccactgatggaggttctagggaaactcttcagaaaggaacaattcgtggc
gatgctgtttattcagctgttgactttacaactggagatgatccatggcctatattcgag
ttgcaaaaggagtttaatgcacccgggaaatcaccccctctttctgcggaattctacact
ggttggcttactcattggggagagaatattgcacacacagacgcaaagtctacagcagct
gctcttggaaaaatattggaaaaaaatgggtctgctgttctttatatggcacatggtggc
acaaactttggattctataatggtgcaaataccggcgagggagagtctgattacaagcct
gatcttacatcctatgattatgatgcacccatttcagagtttggtgatgtggataatgca
aaatataaagcattgcggagggtgattgaaaaatatagtgcagtatccctccctcccctc
ccacgcaataacaaaaagactggatatgggaatttcaggctgcagagaactgcatttttg
ttcgatatgcttaacaaaacagaccatgcagatatcttaaaatctgatgatccggtttca
atggaagtctttggagagatgtttggactggtactatatgcatctgagtacattcataaa
ggcaaaaaaagtattttatccataccaaaggtgcacgacagagctcaagtgtttgtctca
tgctctaccaaaaataagcaagctagaccaaaatatgccgggacaattgagagatggtcg
aatcaagctataagacttccgaatctcagttgcacttcccccatcaaactactaatcctg
gttgaaaacatgggtcgtgtaaattatgggccatatatgtttgacaggaagggtattctt
tcctccgtttatctcgatggacaacctatccataagtggaaaatgctatcagtgcctttc
cagaaaataccagaagtcaagaagataagtccaatcttgaaggatgcactgtctgacaat
atcaaaatatctagccacagaaaactgaaaattaacttagactcaatctcaaaacagcca
gcattctatgttggtagttttgctgttggagaagttcatgattctttcatatcatttact
ggctggggtaaaggaattgcgtttgtcaatgggttcaatattggcagatattggccaaca
aagggaccacaatgtaacctttatgttcctgctccagtcctgcaccgtggccaaaatgtt
gtggtcatacttgaactggaatctccaaatcctgatcttctgctgagctcggttgatgat
ccagatttcacatgtggtacaaaaagttcaaaagtgcatcagctctaa
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