Daucus carota (carrot): 108223429
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Entry
108223429 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108223429 isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00280
Valine, leucine and isoleucine degradation
dcr00650
Butanoate metabolism
dcr01100
Metabolic pathways
dcr04146
Peroxisome
Module
dcr_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108223429
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108223429
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108223429
Enzymes [BR:
dcr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
108223429
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
108223429
NCBI-ProteinID:
XP_017253180
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Position
5:8683984..8693035
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AA seq
410 aa
AA seq
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MRGGALKAVINRFSSSISPRFLRFRDVSASTCFHQMDGSNSCFASAQIDETLGEASETTY
VNGLLPKKFSNQARRSLVNFHDTSNISRHYSSYYKDHTVKHKLLGTIPGFVKIWEVGPRD
GLQNEKEIVPTAVKVELIKMLVSSGLHIVEATSFVSPKWVPQLADAKDVIQAIQNVEGAR
FPVLAPNLKGFEAAVAAGAKEVAVFASASESFSRSNINCSIEDSLARFREVALAAQKLSI
PVRGYVSCVVGCPEEGAVPPSKVAYVAKELLSMGCMEISLGDTIGVGTPGTVVRMLEEVV
NVVPKEKLAVHFHDTYGQALSNILVSLQMGISTVDSSVSGLGGCPYAKSATGNVATEDVV
YMLDGLGVKTNVDLRKLILAGNFISKHLGRPSSSKTAIALSKTLVNVSKL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaggagctcttaaggcagtaattaacagattctccagctcgatttctcctcgc
tttcttcggtttcgggacgtatcagcatccacgtgtttccatcaaatggatggatcaaat
agttgctttgcttcagctcaaattgatgagactttaggagaagcatctgaaactacatat
gtgaacggtttgttaccaaaaaagttctcaaatcaagcacgcagatcgttggtcaatttt
cacgatacgtcaaatatatcaaggcattacagctcctactacaaagatcatacagtaaag
cataagttactaggaaccattcctggatttgtaaaaatatgggaagtcggtccaagggat
gggttgcaaaacgagaaagagattgtgcccactgctgtgaaggttgagttgataaagatg
ctagtttcttccgggctgcatattgttgaggctactagttttgtctctccaaaatgggta
cctcagctagcagatgcaaaggatgtaattcaggcaattcaaaacgttgaaggtgctcga
ttccccgttttagctcctaatctcaaaggttttgaggcagctgttgctgctggagctaaa
gaggtggctgtatttgcttcagcgtccgagtccttctcgcgatcaaacataaattgtagc
attgaggatagtcttgctcgtttccgcgaggttgctcttgctgcgcagaaactttctatt
ccagtccggggatatgtatcctgtgttgtcgggtgtccggaggaaggagcagtaccacct
tcaaaagtggcctatgtggctaaagaacttctgagtatgggctgtatggaaatttccctt
ggtgatacaattggcgttgggacccctggaactgttgttcgaatgctggaagaagttgtt
aatgttgtgcccaaagagaaacttgctgttcatttccatgacacatatgggcaagctctt
tctaacattcttgtgtcccttcaaatggggatcagcacggtcgattcttctgtatcagga
cttgggggttgtccatatgcgaaaagtgcaactggaaatgttgccacagaggatgttgtt
tatatgcttgatggattaggagtgaagaccaatgttgacctaagaaagctgatattggcc
ggaaatttcatctctaaacatcttggaagaccatctagttccaaaactgcaattgccttg
agcaagactttggtaaacgtatcaaagctttaa
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