Daucus carota (carrot): 108223450
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Entry
108223450 CDS
T05350
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108223450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108223450
Membrane trafficking [BR:
dcr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108223450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_8
TPR_19
TPR_7
TPR_12
PPTA
TPR_9
TPR_20
NGF
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
108223450
NCBI-ProteinID:
XP_017253212
UniProt:
A0AAF0X1J9
LinkDB
All DBs
Position
5:7836034..7845896
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AA seq
744 aa
AA seq
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MAMRDLVSGGASCAEPGSSSSSLNPLGALANALIGSSSKTQERLQEIPTATNRISNGNFY
EGGMEPFNALPGSEFDHPSHPSSQGSEFLHGFRSSGQDAFANAWDEVQNPQMPLFQGRDS
LTNIPPNQTQFQPQLDGPPQRVLSNFLHSFVNSGHGGLPFRPTPLPVLGLSEGDKQRIRN
RSSIMARHFFADKNEDFVNAQVNALLSSLDIETDVQARRGPPGRFQDLEDVWNDSQNLQN
GPHSADGWIAEYDQHRVQRGNPNDWVHSFEQLHGANNWASEFENEQSQVASFGQMRGASI
PNLAAMEQTRVLAHTLSQNQDPKFQNSKFLQFVSKMSRGEITFEDNQVKSSGPPAPGDWA
TEYQQQFNGGQSWADQFEREEFPPGPAGWVNEFTSAREQQGPVDDQWVNEFSKLHVADWA
DEFGRQVGEGVLGDDSWADTFDEYVNEQASVRQQAATSRGVYVFSEINPYVGHPNPFQEG
QELFRKGLLSEAVLALEAEVLKNPDNSEGWRFLGITHAENDDDQQAIAAMMRAHEADPTN
LEVLLALGVSHTNELEQAAALKYLYSWLRHHPKYGTIAPPELSDSLYHADVARFFSDAAK
MSPEDADLHIVLGVLYNLSREYDRAIESFRTALELKPRDYSLWNKLGATQANSVQGADAI
LAYQQALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALLMNPKADNAWQYLRISLSC
ASRTDMMEACDSRNLELLQKEFPL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgcgacctagtttccggtggagcatcttgcgccgaaccaggttcatcgtca
tcttctttgaatccactaggcgctctcgctaacgcacttattggctcttcctctaaaact
caggaaaggctacaagagattcctacagcaactaatagaatttctaatgggaatttttat
gagggaggcatggagccttttaatgcacttcctggctctgaatttgatcacccttcacat
ccaagtagccagggctcagaattccttcatggcttcagatcttcaggtcaagatgcattt
gcaaatgcttgggatgaggttcaaaatccccagatgccacttttccagggtagagacagt
ctaacaaacattccaccaaatcaaactcaatttcaaccacagctcgatggcccacctcaa
agagtcctgtcaaattttttgcactcatttgtcaacagtgggcatgggggtcttcctttc
cgtcctacaccccttcctgttcttggattgtctgaaggtgataaacaacgcattcgtaac
cgaagcagtatcatggctcgacatttctttgctgacaagaatgaggactttgttaacgca
caggtaaatgcattattatcttctctggatattgaaactgatgtacaagctaggagaggc
ccgcctggaagatttcaggacttggaggatgtttggaatgactcccaaaatttgcaaaat
ggtccacacagtgctgatggatggattgctgaatatgaccagcacagggtacaaaggggt
aaccctaatgattgggtacactcatttgaacaactgcatggagctaataattgggcatct
gagtttgaaaatgagcaatctcaagttgcatcgtttggccaaatgagaggtgcgagtatt
ccgaacttagctgccatggagcaaactcgcgtattagctcatacactgtctcaaaatcag
gaccccaagttccagaattctaagtttctccagttcgtgtctaaaatgagtcgtggagaa
atcacatttgaggataatcaagtcaagtcatctggaccccctgctcctggagattgggcg
acagaatatcaacaacagtttaatggaggtcaatcatgggctgatcagtttgaacgtgag
gagtttcctcctggacctgctgggtgggtgaatgaattcacttctgcacgtgagcaacag
ggaccagtggatgaccaatgggttaatgagttttctaagttgcatgtcgcagattgggct
gatgaatttgggcgtcaagttggtgaaggggtactaggagatgatagctgggcagatact
tttgatgagtatgtaaatgaacaagcttcagtcaggcagcaggcagcaacctcaagaggg
gtctatgttttctcggagataaatccttatgttggtcaccctaatcctttccaagaaggt
caggaactgttccgcaagggtttattaagtgaggctgtgctagctttggaggccgaagtt
ctaaagaatcctgataattctgaaggctggaggtttcttggaataactcatgctgagaat
gatgatgatcaacaggctattgcagctatgatgcgtgcacatgaagcggatccaactaat
ctggaagtgcttcttgctcttggtgtgagccatacaaatgagttggaacaagcagctgca
ttaaagtatttatatagttggctgcgtcatcatccaaaatatgggacaattgctcctcca
gaactatctgattctctgtatcatgctgatgttgctagattttttagtgatgctgctaaa
atgtcacctgaagatgctgatttacacatagtacttggtgtcttgtataacttatctaga
gaatatgacagagcaattgagtcatttagaacagctttggagcttaagccacgtgattat
tctctctggaacaaacttggggcaacacaagcaaatagtgttcagggcgctgatgcaata
ttagcgtaccaacaggctctggatctgaagcctaattatgttcgtgcatgggccaacatg
ggtatcagttatgccaaccagggcatgtacgaggattcaattcgttattatgtgagagca
ctattaatgaatccaaaagcagacaatgcgtggcagtatttgagaatctctttaagctgt
gcatccagaactgacatgatggaagcttgtgactcccggaatcttgaacttctccagaaa
gagtttccactgtga
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