Daucus carota (carrot): 108223498
Help
Entry
108223498 CDS
T05350
Name
(RefSeq) zinc finger CCCH domain-containing protein 24 isoform X3
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108223498
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108223498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
zf-CCCH
Methyltransf_25
RRM_1
Methyltransf_4
MTS
Ubie_methyltran
Methyltransf_15
Ish1
Methyltransf_32
PCMT
Methyltransf_11
PrmA
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108223498
NCBI-ProteinID:
XP_017253286
LinkDB
All DBs
Position
5:complement(38832899..38843510)
Genome browser
AA seq
823 aa
AA seq
DB search
MDGQDSISDQPIVSPPAPPAQPEPESTQPPAPVPEPGEKRKQPEPDSAPTPPPPEKSKHP
LWKTSLCSYFRRTGGECSHGETCRYAHSEEELRQRPDNTWDPTSERGKKMKVENGESVEV
KRGTDEVSITEAIGEDCCSDNVLEKCLINLPMRWSSDNLRSFLTDNGVHFKSAKKRKGML
VGFVSFETAEQVKSAVEELNGKSIGNKDLKIVDATPRAYEKRKAGEISLPQSTQNTSENS
DAPKSSIGVDNTDSNDDNMTVESTVSKSRSARDSVTPLAHMSYVDQLEHKKSSLTQMLKK
LTRNARKACPNGVSLPEWILNSREIGGLACKLEGIVESPLVSGYRNKCEFSVGYSLQAKV
TVGFSLGNFREGVIAVEEPLNCPNVSKIACKYAAIFQEFLQHSELPIWNRLNNTGFWRQL
TVREGRKPGQSTEVEDSEAHIAEVLLMVQVSTAGFDDGMVNGEFEKMTNAFATGASANTP
PLPLTALLIQDHTGISNVAPADAPLRSLTIPNEKSETRQDDVKDVVEARIHDYISNLQFC
ISATAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGMVVGIEMN
ASAVSDAIRNAEINGIKNCRFVCSKAEDALGSLLKEYLKMHQKPVDVPQIDDVTVHGEVT
HTENATDTKENLIIELENCDGAPKCDTNGGQKSDSQQSCSSATAKPVQYFKNVVAIVDPP
RVGLHPTVIKALRTHPHLRRLVYISCNPESLVANAIELCTPSFDKTEKGNKNNRGWRNMS
SAGLARHRAKSMPNSEPFQPIKAMAVDLFPHTPHCELVMLLER
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacggccaggattccatctccgaccaaccaattgtctccccaccagcaccgccggca
caacccgaacccgagtccacccaaccacccgcccccgtacccgaacccggcgagaagcgc
aaacaacccgaacccgactccgccccgaccccaccaccgccggaaaagtcaaagcacccg
ctgtggaaaacgagtttgtgctcgtactttcgtcgaacaggtggtgagtgtagccacggc
gagacgtgtcgatatgcgcatagcgaagaggagctgagacaacggccggataacacgtgg
gacccgacatccgagagggggaagaagatgaaggttgagaacggggagagtgtagaggtc
aagagaggaactgatgaggtttcgattaccgaggcgattggagaggattgctgttctgac
aatgtgttggagaagtgtttaattaatttgccgatgaggtggagttctgataatttacgc
agcttccttactgataatggagttcactttaaatcagccaagaagaggaagggcatgctt
gttggatttgtgagttttgagaccgctgaacaagtgaaaagtgcagttgaggagttgaat
ggcaaatccattgggaacaaggatctgaagattgtagatgccaccccgagggcctatgag
aaaaggaaagcaggggaaatttctctcccacagagtactcaaaatacttctgaaaactcg
gacgcccccaaatcttctattggtgttgataacactgactctaatgatgacaatatgact
gtggagagtacagtctcgaagagtagaagtgcacgtgactcagtgacaccacttgctcac
atgtcctatgttgatcagctggagcacaagaagagttctttaactcaaatgcttaagaaa
ctaactcgaaatgcacgtaaagcatgtccaaatggcgtttcacttccagaatggattctt
aattctagggaaatcggtggccttgcatgcaagcttgaaggtatagttgaatcaccactt
gttagtggttaccgaaacaagtgtgaattctctgttggctattctttacaggctaaagtt
actgttggattttcgcttggaaatttcagggagggtgtgatagcagttgaagaacctctg
aattgtccaaatgtttcaaaaattgcctgtaaatatgccgccatatttcaagaatttctg
cagcattcggagttaccaatctggaacagattaaataacactggattttggcgtcagctc
actgtccgagaaggcaggaagcctgggcagagcactgaagttgaagattctgaagcccat
attgcggaagtcttgctcatggttcaggtttccacagcaggatttgatgatggaatggta
aatggtgaattcgagaagatgactaatgcatttgctacaggagcttcagcgaatactcct
ccattgcctctaactgctttgttaattcaggatcataccggaatatcaaacgtagctcca
gcggatgcgccattgcgctctttaactattccaaatgaaaagagtgaaactagacaagac
gatgtgaaagatgttgtggaagcaaggattcatgattatattagcaatcttcagttttgt
atatctgcaacagcttttttccaggtgaacacccttgcggcagagaagctctattctctt
gctggggattgggctggtctgggtcctgataccttgctctttgatatctgctgtggcacg
ggtaccattggcctaacattagctcatcgtgttggtatggttgtggggattgagatgaat
gcctcagctgtttcagatgctattcgcaatgctgagattaatgggataaagaactgcaga
tttgtctgttcgaaggcagaagacgcgctggggtctcttttgaaagagtatttaaaaatg
catcagaaacccgtcgatgttccacaaattgatgatgttacagttcatggggaagttact
catactgagaatgcaacagacacaaaagagaacttgatcattgagctagaaaattgtgat
ggtgcccccaagtgtgacacaaatggaggccagaaaagtgattcacaacagagttgcagt
tcagcaactgctaaacctgtgcagtattttaagaatgttgttgctattgttgatcctccg
cgtgttggacttcatcctaccgtgattaaagctttgagaactcatccacatttacggagg
cttgtatacatatcttgcaatcctgaaagtttagtggccaatgctattgagctatgcaca
ccatcttttgataaaactgaaaaggggaataaaaataatagaggttggagaaatatgagc
agtgctggtttggcacgccatcgtgccaaatctatgcccaattcagagcctttccagcca
ataaaagcaatggcggttgatcttttccctcatactccgcattgtgagctggttatgctt
ttggagaggtaa
DBGET
integrated database retrieval system
