Daucus carota (carrot): 108223554
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Entry
108223554 CDS
T05350
Name
(RefSeq) condensin-1 complex subunit CAP-D2 isoform X1
KO
K06677
condensin complex subunit 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223554
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
108223554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
SCD
Cnd3
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
108223554
NCBI-ProteinID:
XP_017253367
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All DBs
Position
5:8554035..8564924
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AA seq
1334 aa
AA seq
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MAPPFIFSPNLETESESDRLSVQTLTDISSFRPSSLEEFVKAVSFDLSDKELFCVEEQDL
FDRVYSLVKNFSSLSPSCKFNLVESLRSNFSVLLPNVDSLSRASQSQHDDQIPLVDRIAS
HRNAFKIYTYFLIQVVLAEESNISTNHSTKVAASSRKKQLINSWNWESQRSRILNLIANS
LEINLSLLFGSSDPDENYISFIMKNSFFMFENATMLKDADTKDALCRIIGTCATKYHYTA
HSCASILHLIHRHDFVVSHLAHAVAIAEKKYADGSMATYLIREIGRTNPKEYVRDAVGAE
NIGRFLVELSDRLPKLISTNIGLLVPHFGGESYKIRNALVGVLGKLVSKAFSDFEGEVSS
KSIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHAVSIGLWNEVAAVAAGRLE
DKSAIVRKSALNLLIIMLQHNPFGPQLRIASFEATLEQYRKKLKELVPDSQPENVLDELP
LDSDACNGDGEVDDPRAEARPKEQQDSLTDSCLLEVDNEIIQENVVPDVGNMEQTRTLIA
SLEAGLCFSKCVSDTMSTLVQLMASSSASDVENTILLLMRCKQFQIDGAESCLRKMLPLV
FSQEKSIYEAVENAFITIYLKKSPVETAKNLMNLAIESNIGDLAALEFIVAALVSKGDIT
SSMLSSLWDFFCFNISGTTAEQSRGALFVLCMAAKSSPAVLGLHLQDIVDIGFGRWAKMD
PLLARTACIALQRLSGEDQKKLLSKSGSRLFGILESLITGSGLPENIWYAAADKAITTIY
TIHPSPETFAADLVKKVVRSVFAFNGGDDLETVTPNEYTDVLTKLEVTKLSRFLYIVSHI
AMSQLVYIESCVRKIQKEKAKKERLVAEGKSVDCNGMTPHDADKENGINAELGLACTDDT
ILDTLSASAEKEIVSAGSVEKNLIGSCGSFLSKLCRNITLMQKYPELQASGMLALCRLMI
IDTDFCDANLQLLFTVVESAPSETVRSNCTIALGDLAVRFPNLLEPWTEHMYARLSDTSV
AVRKNAVLVLSHLILNDMMKVKGHIYEMAIRLEDEDERISSLAKLFFHELSKKGSNPIYN
LLPDILGKLSNKNLERETFCNIMQFLIGSIKKDKQMEALVEKLCNRFSGVTDTKQWEYIS
YCLSQLSFTDKGMKKLIELFKTYEHVLCEDLVMDHFKNIINKGKKFAKPELKTCIEEFEE
KINKFHIEKKEQEVTARNAEAHQQKLRSLENIKVAVEDGLESTESKTSKAGTDSEVTDEV
STASVPTERIPESEDNSPASSELIEPESSDSEVQSAQVISKEVMKSRAKKATVKDEKCDS
EVPPRITRSRRRNV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcccttcattttctccccgaacctcgaaaccgaatccgagtccgaccgtctc
tccgtccaaaccctcaccgacatctcctccttccgcccatcctctctggaagaattcgtc
aaagccgtctccttcgatctctccgacaaagagctcttctgtgtcgaagagcaggactta
ttcgaccgcgtctactctctcgtcaaaaacttctcatctctctctccgtcttgcaaattc
aatctcgtcgagagtctaaggtccaatttcagtgtcttgcttcccaatgttgattctctt
tccagggcttcgcagtctcaacacgatgaccagattccgcttgttgatcgtattgcgtcg
cacaggaatgcgtttaagatttacacgtattttcttattcaggttgtgctcgcggaggag
tcaaacatttcgaccaatcactccactaaagttgcagcgagtagtaggaaaaaacagctt
attaattcatggaactgggaatcacagagaagccggatactgaatttgattgctaattct
ctggagatcaacctttccttgttatttggatcctcggatcctgatgaaaattacatatca
tttattatgaagaattccttctttatgtttgagaatgcaacgatgttaaaggatgcagac
acgaaagatgctttgtgtcgtataattggtacttgtgccaccaaataccattatacggca
cattcatgtgcttcaatccttcatctgattcatagacatgattttgttgtttcccacttg
gctcatgcggtcgctatagctgaaaagaagtatgctgatggaagcatggccacttacctt
attcgagagattggtagaactaatccaaaagagtatgtaagagatgctgttggggctgaa
aatattggccggtttctagtggaactttctgacagactgccaaagttgatatccactaac
ataggtttattggttcctcactttggtggagagtcgtataagataaggaatgcccttgtt
ggggttttagggaagttggtctccaaagccttcagtgacttcgagggtgaagtgagttcc
aaatctattcgccttcgaaccaagcaggccatgttggaaattttgctggaacgttgtcgt
gatgtttctgcttatactaggagtcgggttctacaagtctgggctgagttatgcgaagaa
catgctgtttcaattggtctttggaatgaggttgcagcagtagcagcagggaggttggag
gataaaagtgcaattgtacgaaagtctgcactaaatttacttattattatgttacaacat
aacccgtttggtccacaacttcgaatagcttcttttgaggcaactctagagcagtacagg
aagaagttgaaggagcttgtgcctgattcccaaccagagaatgttctagatgagctgcct
ttagatagtgatgcttgcaatggagatggcgaggttgatgatccaagagctgaagccaga
cccaaggaacaacaagatagtttaactgatagttgtttgctggaagtagataatgaaatt
atccaggagaatgttgttccagatgttggaaatatggagcaaactaggactctgattgca
tcactagaggcgggcttgtgtttctcgaagtgtgtatcggacacaatgtcaacccttgtg
caattgatggcttcttcttctgcatctgatgttgagaacacaatcctactgttaatgagg
tgcaagcagtttcaaattgatggagcagaatcttgcctccgtaaaatgttacccctggtt
ttctcgcaggaaaaatctatatatgaagctgtggagaatgcatttatcacaatctattta
aagaaaagtcctgtagaaactgctaaaaatcttatgaatcttgcaatcgaatcaaatatc
ggagatcttgcagctttagagttcattgttgctgctctggtatcgaaaggggatattacg
agtagcatgctatcatctttatgggatttcttttgttttaacatcagcggaaccacagca
gagcagagccgtggtgctttatttgtcctttgcatggctgcaaaatcatctcctgcagtt
cttggtttgcacctacaagacattgttgatattggtttcggtcgatgggcaaaaatggac
cctttgcttgctagaacagcttgcattgcacttcaaaggttgtcaggagaggatcagaaa
aaactgttgtctaagagtggaagccggttatttggtattctagaaagcctaattactggg
tctggtcttccagaaaacatatggtatgctgctgctgataaagctattactacaatatac
acaatccatccaagtcctgagacctttgcagcggatctggtgaaaaaagttgtcagatct
gtatttgcctttaatggaggggatgacctggaaactgtcacccccaatgaatatactgat
gtcctcaccaaacttgaagtaacaaaacttagcaggtttttatatattgtcagccacatc
gccatgagtcagttagtctatattgaatcttgcgttcgaaagattcagaaagagaaagca
aaaaaagaaagattagttgcagaagggaagagtgttgactgtaatggcatgacacctcat
gatgcagacaaggaaaatggaatcaacgcagagctaggtctggcttgcactgatgacacg
atacttgatactttatctgcaagtgcagagaaggaaatagtttctgctggttctgttgag
aagaatctgattgggtcgtgtggctcttttctatcaaaactttgtcgaaatataacattg
atgcagaagtatcctgagttgcaggcatctggaatgcttgctctatgtcgactcatgatt
attgatacagatttttgtgatgcaaatctccagcttctttttactgtggtggagagtgcg
ccgtcagaaactgttcgctctaattgcactattgctcttggagacctggcagttcgattt
ccaaatttattggaaccgtggactgaacatatgtatgcaaggttaagtgatacctcagtt
gctgttcggaagaatgcagtgttggttttgtcccacctgattttaaatgacatgatgaag
gttaaaggccacatatatgaaatggctatacgattagaagatgaagatgaacggatttct
agccttgccaaactattctttcacgagttgtcaaaaaaagggagtaatcctatctataat
ttgctgcctgacatccttggcaaactatccaacaagaacttggaaagagaaactttttgc
aacattatgcaatttttgattggttctatcaagaaggataaacaaatggaggctctcgtt
gaaaagctttgcaacagattcagcggagtcacagataccaaacaatgggaatacatatct
tactgtctctctcagttatcctttactgataaaggcatgaaaaagttaatcgagttattc
aagacttatgaacatgtcctgtgtgaagatttggtgatggatcactttaaaaatatcatc
aataagggcaagaaatttgctaagccagaacttaaaacttgcattgaggagttcgaggag
aagataaataagtttcatattgaaaaaaaggaacaagaggttactgctagaaatgccgag
gcccaccaacaaaaacttcgaagcctggaaaacattaaagttgctgttgaggatgggcta
gaaagtacggaatccaaaacctctaaagctgggacagacagcgaggtcaccgatgaagta
agcactgcatctgtgccaactgaacggattccagagtcggaagataattcacctgcttct
agtgagctgatagaacctgagtcttctgacagcgaggttcagtctgcacaagttatatct
aaagaggtgatgaaatccagagccaagaaagccaccgtaaaggatgaaaagtgtgactct
gaagttccccccagaattaccaggtcacgaagaaggaatgtatga
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