Daucus carota (carrot): 108223592
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Entry
108223592 CDS
T05350
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
dcr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108223592
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108223592
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108223592
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108223592
03036 Chromosome and associated proteins [BR:
dcr03036
]
108223592
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108223592
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108223592
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108223592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Phage_Inh_C
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
108223592
NCBI-ProteinID:
XP_017253402
LinkDB
All DBs
Position
5:35931186..35939615
Genome browser
AA seq
540 aa
AA seq
DB search
MVVMEMDIARDVTDLDPELLQLPEVSPLALKTSPQIAEELFGQWLSLPDTGRLVKSLIDD
AKTGTSFGASGNSTSTNASGISPLPSLFPAANTPPLSPRSAVGSPRTMKQRASFSSLGSP
LKLVKENVREVIPQFYFQDGPPPSEELRVQCNSRVDEIFNRNMDGLQVNEFKTVTKDICK
LPSFLSTTLFLKIDTNCTGLVTRDAFIKYWVESKMITMDVATQIYKILKQPDCKYLTQAD
FRPALKELLATHPGLEFLQNTPEFQERYAETVIYRIFYYINRSGNGHLTLRELRRGNLVA
AMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIKYGNHALTYRIVD
RIFSQVPRKFTSSIEGKMGYEDFVYFMLAEEDKSAEPSLEYWFKCIDLDGNGVLTRNEMQ
FFYEEQLHRMECMGQEPVLFEDILCQIVDMISPEREDYITIQDFRGCKLSGNVFNILFNL
NKFMAFESRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGESNGSAEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgatggaaatggatatagcgagggatgttacggatttggacccggagttgttg
cagctgccagaggtgtctcctctggcgctcaaaacaagtcctcaaattgccgaggagctc
tttggacagtggttgtcgttaccggacaccggtagactggtaaaatcattaatagatgat
gcaaaaacgggcaccagttttggtgcgtcagggaactccacctctacaaatgcttctggg
attagtccattgccttctctcttccctgctgctaatacgcctccactttcaccaagaagt
gctgtaggttctcctcgaactatgaagcagagggccagtttttcttcgttgggttctccg
ctaaaattggtcaaggaaaatgtgcgggaagtcataccacagttttatttccaagatggt
cctcctccatcagaggagctaagagtacagtgcaattctagagttgatgaaatttttaac
agaaatatggatggtttacaagtaaatgagttcaaaactgtcaccaaggatatatgtaaa
ctaccctctttcctttccaccacacttttcttaaagatcgacaccaactgcacagggcta
gtaaccagagatgcatttattaaatactgggttgaaagcaaaatgataacaatggatgta
gctacacaaatatacaaaatcctaaagcaaccagactgcaaataccttactcaggctgac
tttagacctgctcttaaagagcttttggctacccatccaggattggaattcttgcagaat
actccggaatttcaggaaagatacgctgaaactgtcatatacagaatattctactacatc
aatagatctggaaatggccatcttactctgagggagctcagacggggaaacttggttgct
gcgatgcagcatgcagatgaggaagaggacattaacaaagttctgagatacttctcatat
gagcacttctatgtcatatattgcaagttctgggaactggatacagaccatgatttcctg
atagataaagagaatctcatcaaatacggtaatcatgcactcacatacaggattgttgac
cgaatattttcacaggttccgagaaagttcacgagcagtattgaagggaagatgggttat
gaagattttgtctattttatgctagcagaagaggacaagtcggctgagcctagccttgag
tattggtttaagtgcattgatttagatggcaatggagttctcacacggaatgaaatgcag
ttcttttatgaggagcaactgcatcggatggaatgcatgggccaagagcctgttcttttc
gaggatattttgtgtcaaatagttgatatgatttccccagagagagaagattacattacc
atacaggacttcagaggatgtaaactgtcaggaaacgttttcaacatactttttaatcta
aacaagtttatggcttttgaaagtcgtgatccattcctaattcgtcaggaacgggaagat
ccaactctaacagagtgggaccgttttgcgcacagagaatatatcaggttatcaatggaa
gaagacggggaatcaaatgggagtgccgaggtttgggatgaatcactagaggccccattt
tag
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